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Genomics for public health and international surveillance of antimicrobial resistance.
Baker KS, Jauneikaite E, Hopkins KL, Lo SW, Sánchez-Busó L, Getino M, Howden BP, Holt KE, Musila LA, Hendriksen RS, Amoako DG, Aanensen DM, Okeke IN, Egyir B, Nunn JG, Midega JT, Feasey NA, Peacock SJ; SEDRIC Genomics Surveillance Working Group. Baker KS, et al. Among authors: getino m. Lancet Microbe. 2023 Dec;4(12):e1047-e1055. doi: 10.1016/S2666-5247(23)00283-5. Epub 2023 Nov 14. Lancet Microbe. 2023. PMID: 37977162 Free article. Review.
Whole-genome sequencing reveals widespread presence of Staphylococcus capitis NRCS-A clone in neonatal units across the United Kingdom.
Wan Y, Ganner M, Mumin Z, Ready D, Moore G, Potterill I, Paranthaman K, Jauneikaite E, Patel B, Harley A, Getino M; UKHSA S. capitis Incident Management Team; Brown CS, Demirjian A, Pichon B. Wan Y, et al. Among authors: getino m. J Infect. 2023 Sep;87(3):210-219. doi: 10.1016/j.jinf.2023.06.020. Epub 2023 Jun 30. J Infect. 2023. PMID: 37394013 Free article.
Integrated analysis of patient networks and plasmid genomes reveals a regional, multi-species outbreak of carbapenemase-producing Enterobacterales carrying both blaIMP and mcr-9 genes.
Wan Y, Myall AC, Boonyasiri A, Bolt F, Ledda A, Mookerjee S, Weiße AY, Getino M, Turton JF, Abbas H, Prakapaite R, Sabnis A, Abdolrasouli A, Malpartida-Cardenas K, Miglietta L, Donaldson H, Gilchrist M, Hopkins KL, Ellington MJ, Otter JA, Larrouy-Maumus G, Edwards AM, Rodriguez-Manzano J, Didelot X, Barahona M, Holmes AH, Jauneikaite E, Davies F. Wan Y, et al. Among authors: getino m. J Infect Dis. 2024 Jan 20:jiae019. doi: 10.1093/infdis/jiae019. Online ahead of print. J Infect Dis. 2024. PMID: 38245822
Harmonisation of in-silico next-generation sequencing based methods for diagnostics and surveillance.
Nunez-Garcia J, AbuOun M, Storey N, Brouwer MS, Delgado-Blas JF, Mo SS, Ellaby N, Veldman KT, Haenni M, Châtre P, Madec JY, Hammerl JA, Serna C, Getino M, La Ragione R, Naas T, Telke AA, Glaser P, Sunde M, Gonzalez-Zorn B, Ellington MJ, Anjum MF. Nunez-Garcia J, et al. Among authors: getino m. Sci Rep. 2022 Aug 23;12(1):14372. doi: 10.1038/s41598-022-16760-9. Sci Rep. 2022. PMID: 35999234 Free PMC article.
Extensive microbial diversity within the chicken gut microbiome revealed by metagenomics and culture.
Gilroy R, Ravi A, Getino M, Pursley I, Horton DL, Alikhan NF, Baker D, Gharbi K, Hall N, Watson M, Adriaenssens EM, Foster-Nyarko E, Jarju S, Secka A, Antonio M, Oren A, Chaudhuri RR, La Ragione R, Hildebrand F, Pallen MJ. Gilroy R, et al. Among authors: getino m. PeerJ. 2021 Apr 6;9:e10941. doi: 10.7717/peerj.10941. eCollection 2021. PeerJ. 2021. PMID: 33868800 Free PMC article.
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