Gerstein MB - Search Results

1

Haplotype-resolved diverse human genomes and integrated analysis of structural variation.

Ebert P, Audano PA, Zhu Q, Rodriguez-Martin B, Porubsky D, Bonder MJ, Sulovari A, Ebler J, Zhou W, Serra Mari R, Yilmaz F, Zhao X, Hsieh P, Lee J, Kumar S, Lin J, Rausch T, Chen Y, Ren J, Santamarina M, Höps W, Ashraf H, Chuang NT, Yang X, Munson KM, Lewis AP, Fairley S, Tallon LJ, Clarke WE, Basile AO, Byrska-Bishop M, Corvelo A, Evani US, Lu TY, Chaisson MJP, Chen J, Li C, Brand H, Wenger AM, Ghareghani M, Harvey WT, Raeder B, Hasenfeld P, Regier AA, Abel HJ, Hall IM, Flicek P, Stegle O, Gerstein MB, Tubio JMC, Mu Z, Li YI, Shi X, Hastie AR, Ye K, Chong Z, Sanders AD, Zody MC, Talkowski ME, Mills RE, Devine SE, Lee C, Korbel JO, Marschall T, Eichler EE. Ebert P, et al. Among authors: gerstein mb. Science. 2021 Apr 2;372(6537):eabf7117. doi: 10.1126/science.abf7117. Epub 2021 Feb 25. Science. 2021. PMID: 33632895 Free PMC article.

2

Whole-genome trees based on the occurrence of folds and orthologs: implications for comparing genomes on different levels.

Lin J, Gerstein M. Lin J, et al. Genome Res. 2000 Jun;10(6):808-18. doi: 10.1101/gr.10.6.808. Genome Res. 2000. PMID: 10854412 Free PMC article.

3

Protein folds in the worm genome.

Gerstein M, Lin J, Hegyi H. Gerstein M, et al. Pac Symp Biocomput. 2000:30-41. doi: 10.1142/9789814447331_0004. Pac Symp Biocomput. 2000. PMID: 10902154 Free article.

4

Beyond synexpression relationships: local clustering of time-shifted and inverted gene expression profiles identifies new, biologically relevant interactions.

Qian J, Dolled-Filhart M, Lin J, Yu H, Gerstein M. Qian J, et al. J Mol Biol. 2001 Dec 14;314(5):1053-66. doi: 10.1006/jmbi.2000.5219. J Mol Biol. 2001. PMID: 11743722

5

A Bayesian networks approach for predicting protein-protein interactions from genomic data.

Jansen R, Yu H, Greenbaum D, Kluger Y, Krogan NJ, Chung S, Emili A, Snyder M, Greenblatt JF, Gerstein M. Jansen R, et al. Science. 2003 Oct 17;302(5644):449-53. doi: 10.1126/science.1087361. Science. 2003. PMID: 14564010

6

Global identification of human transcribed sequences with genome tiling arrays.

Bertone P, Stolc V, Royce TE, Rozowsky JS, Urban AE, Zhu X, Rinn JL, Tongprasit W, Samanta M, Weissman S, Gerstein M, Snyder M. Bertone P, et al. Science. 2004 Dec 24;306(5705):2242-6. doi: 10.1126/science.1103388. Epub 2004 Nov 11. Science. 2004. PMID: 15539566

7

High-resolution mapping of DNA copy alterations in human chromosome 22 using high-density tiling oligonucleotide arrays.

Urban AE, Korbel JO, Selzer R, Richmond T, Hacker A, Popescu GV, Cubells JF, Green R, Emanuel BS, Gerstein MB, Weissman SM, Snyder M. Urban AE, et al. Among authors: gerstein mb. Proc Natl Acad Sci U S A. 2006 Mar 21;103(12):4534-9. doi: 10.1073/pnas.0511340103. Epub 2006 Mar 14. Proc Natl Acad Sci U S A. 2006. PMID: 16537408 Free PMC article.

8

A supervised hidden markov model framework for efficiently segmenting tiling array data in transcriptional and chIP-chip experiments: systematically incorporating validated biological knowledge.

Du J, Rozowsky JS, Korbel JO, Zhang ZD, Royce TE, Schultz MH, Snyder M, Gerstein M. Du J, et al. Bioinformatics. 2006 Dec 15;22(24):3016-24. doi: 10.1093/bioinformatics/btl515. Epub 2006 Oct 12. Bioinformatics. 2006. PMID: 17038339

9

Global identification and characterization of transcriptionally active regions in the rice genome.

Li L, Wang X, Sasidharan R, Stolc V, Deng W, He H, Korbel J, Chen X, Tongprasit W, Ronald P, Chen R, Gerstein M, Deng XW. Li L, et al. PLoS One. 2007 Mar 14;2(3):e294. doi: 10.1371/journal.pone.0000294. PLoS One. 2007. PMID: 17372628 Free PMC article.

10

Systematic prediction and validation of breakpoints associated with copy-number variants in the human genome.

Korbel JO, Urban AE, Grubert F, Du J, Royce TE, Starr P, Zhong G, Emanuel BS, Weissman SM, Snyder M, Gerstein MB. Korbel JO, et al. Among authors: gerstein mb. Proc Natl Acad Sci U S A. 2007 Jun 12;104(24):10110-5. doi: 10.1073/pnas.0703834104. Epub 2007 Jun 5. Proc Natl Acad Sci U S A. 2007. PMID: 17551006 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

641 results

Search Page