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Advances in computational and experimental approaches for deciphering transcriptional regulatory networks: Understanding the roles of cis-regulatory elements is essential, and recent research utilizing MPRAs, STARR-seq, CRISPR-Cas9, and machine learning has yielded valuable insights.
Moeckel C, Mouratidis I, Chantzi N, Uzun Y, Georgakopoulos-Soares I. Moeckel C, et al. Among authors: georgakopoulos soares i. Bioessays. 2024 May 8:e2300210. doi: 10.1002/bies.202300210. Online ahead of print. Bioessays. 2024. PMID: 38715516 Review.
Massively parallel reporter assays and mouse transgenic assays provide complementary information about neuronal enhancer activity.
Kosicki M, Cintrón DL, Page NF, Georgakopoulos-Soares I, Akiyama JA, Plajzer-Frick I, Novak CS, Kato M, Hunter RD, von Maydell K, Barton S, Godfrey P, Beckman E, Sanders SJ, Pennacchio LA, Ahituv N. Kosicki M, et al. Among authors: georgakopoulos soares i. bioRxiv [Preprint]. 2024 Apr 23:2024.04.22.590634. doi: 10.1101/2024.04.22.590634. bioRxiv. 2024. PMID: 38712228 Free PMC article. Preprint.
kmerDB: A database encompassing the set of genomic and proteomic sequence information for each species.
Mouratidis I, Baltoumas FA, Chantzi N, Patsakis M, Chan CSY, Montgomery A, Konnaris MA, Aplakidou E, Georgakopoulos GC, Das A, Chartoumpekis DV, Kovac J, Pavlopoulos GA, Georgakopoulos-Soares I. Mouratidis I, et al. Among authors: georgakopoulos soares i. Comput Struct Biotechnol J. 2024 Apr 21;23:1919-1928. doi: 10.1016/j.csbj.2024.04.050. eCollection 2024 Dec. Comput Struct Biotechnol J. 2024. PMID: 38711760 Free PMC article.
The determinants of the rarity of nucleic and peptide short sequences in nature.
Chantzi N, Mareboina M, Konnaris MA, Montgomery A, Patsakis M, Mouratidis I, Georgakopoulos-Soares I. Chantzi N, et al. Among authors: georgakopoulos soares i. NAR Genom Bioinform. 2024 Apr 4;6(2):lqae029. doi: 10.1093/nargab/lqae029. eCollection 2024 Jun. NAR Genom Bioinform. 2024. PMID: 38584871 Free PMC article.
Approaches of dengue control: vaccine strategies and future aspects.
Akter R, Tasneem F, Das S, Soma MA, Georgakopoulos-Soares I, Juthi RT, Sazed SA. Akter R, et al. Among authors: georgakopoulos soares i. Front Immunol. 2024 Feb 29;15:1362780. doi: 10.3389/fimmu.2024.1362780. eCollection 2024. Front Immunol. 2024. PMID: 38487527 Free PMC article. Review.
Author Correction: Integrative single-cell characterization of a frugivorous and an insectivorous bat kidney and pancreas.
Gordon WE, Baek S, Nguyen HP, Kuo YM, Bradley R, Fong SL, Kim N, Galazyuk A, Lee I, Ingala MR, Simmons NB, Schountz T, Cooper LN, Georgakopoulos-Soares I, Hemberg M, Ahituv N. Gordon WE, et al. Among authors: georgakopoulos soares i. Nat Commun. 2024 Feb 27;15(1):1777. doi: 10.1038/s41467-024-44937-5. Nat Commun. 2024. PMID: 38413559 Free PMC article. No abstract available.
Utilizing nullomers in cell-free RNA for early cancer detection.
Montgomery A, Tsiatsianis GC, Mouratidis I, Chan CSY, Athanasiou M, Papanastasiou AD, Kantere V, Syrigos N, Vathiotis I, Syrigos K, Yee NS, Georgakopoulos-Soares I. Montgomery A, et al. Among authors: georgakopoulos soares i. Cancer Gene Ther. 2024 Feb 14. doi: 10.1038/s41417-024-00741-3. Online ahead of print. Cancer Gene Ther. 2024. PMID: 38351138
44 results