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Bioinformatic Tools for NGS-Based Metagenomics to Improve the Clinical Diagnosis of Emerging, Re-Emerging and New Viruses.
Ibañez-Lligoña M, Colomer-Castell S, González-Sánchez A, Gregori J, Campos C, Garcia-Cehic D, Andrés C, Piñana M, Pumarola T, Rodríguez-Frias F, Antón A, Quer J. Ibañez-Lligoña M, et al. Among authors: garcia cehic d. Viruses. 2023 Feb 20;15(2):587. doi: 10.3390/v15020587. Viruses. 2023. PMID: 36851800 Free PMC article. Review.
Next-Generation Sequencing for Confronting Virus Pandemics.
Quer J, Colomer-Castell S, Campos C, Andrés C, Piñana M, Cortese MF, González-Sánchez A, Garcia-Cehic D, Ibáñez M, Pumarola T, Rodríguez-Frías F, Antón A, Tabernero D. Quer J, et al. Among authors: garcia cehic d. Viruses. 2022 Mar 14;14(3):600. doi: 10.3390/v14030600. Viruses. 2022. PMID: 35337007 Free PMC article. Review.
Deep sequencing in the management of hepatitis virus infections.
Quer J, Rodríguez-Frias F, Gregori J, Tabernero D, Soria ME, García-Cehic D, Homs M, Bosch A, Pintó RM, Esteban JI, Domingo E, Perales C. Quer J, et al. Virus Res. 2017 Jul 15;239:115-125. doi: 10.1016/j.virusres.2016.12.020. Epub 2016 Dec 28. Virus Res. 2017. PMID: 28040474 Review.
Naturally occurring SARS-CoV-2 gene deletions close to the spike S1/S2 cleavage site in the viral quasispecies of COVID19 patients.
Andrés C, Garcia-Cehic D, Gregori J, Piñana M, Rodriguez-Frias F, Guerrero-Murillo M, Esperalba J, Rando A, Goterris L, Codina MG, Quer S, Martín MC, Campins M, Ferrer R, Almirante B, Esteban JI, Pumarola T, Antón A, Quer J. Andrés C, et al. Emerg Microbes Infect. 2020 Dec;9(1):1900-1911. doi: 10.1080/22221751.2020.1806735. Emerg Microbes Infect. 2020. PMID: 32752979 Free PMC article.
Host-dependent editing of SARS-CoV-2 in COVID-19 patients.
Gregori J, Cortese MF, Piñana M, Campos C, Garcia-Cehic D, Andrés C, Abril JF, Codina MG, Rando A, Esperalba J, Sulleiro E, Joseph J, Saubí N, Colomer-Castell S, Martin MC, Castillo C, Esteban JI, Pumarola T, Rodriguez-Frias F, Antón A, Quer J. Gregori J, et al. Emerg Microbes Infect. 2021 Dec;10(1):1777-1789. doi: 10.1080/22221751.2021.1969868. Emerg Microbes Infect. 2021. PMID: 34402744 Free PMC article.
A year living with SARS-CoV-2: an epidemiological overview of viral lineage circulation by whole-genome sequencing in Barcelona city (Catalonia, Spain).
Andrés C, Piñana M, Borràs-Bermejo B, González-Sánchez A, García-Cehic D, Esperalba J, Rando A, Zules-Oña RG, Campos C, Codina MG, Blanco-Grau A, Colomer-Castell S, Martín MC, Castillo C, García-Comuñas K, Vásquez-Mercado R, Martins-Martins R, Saubi N, Campins-Martí M, Pumarola T, Quer J, Antón A. Andrés C, et al. Emerg Microbes Infect. 2022 Dec;11(1):172-181. doi: 10.1080/22221751.2021.2011617. Emerg Microbes Infect. 2022. PMID: 34842496 Free PMC article.
Characteristics of 24 SARS-CoV-2-Sequenced Reinfection Cases in a Tertiary Hospital in Spain.
Borras-Bermejo B, Piñana M, Andrés C, Zules R, González-Sánchez A, Esperalba J, Parés-Badell O, García-Cehic D, Rando A, Campos C, Codina MG, Martín MC, Castillo C, García-Comuñas K, Vásquez-Mercado R, Martins-Martins R, Colomer-Castell S, Pumarola T, Campins M, Quer J, Antón A. Borras-Bermejo B, et al. Among authors: garcia cehic d. Front Microbiol. 2022 May 26;13:876409. doi: 10.3389/fmicb.2022.876409. eCollection 2022. Front Microbiol. 2022. PMID: 35722299 Free PMC article.
The frequency of defective genomes in Omicron differs from that of the Alpha, Beta and Delta variants.
Campos C, Colomer-Castell S, Garcia-Cehic D, Gregori J, Andrés C, Piñana M, González-Sánchez A, Borràs B, Parés-Badell O, Adombi CM, Ibañez-Lligoña M, Esperalba J, Codina MG, Rando-Segura A, Saubí N, Esteban JI, Rodriguez-Frías F, Pumarola T, Antón A, Quer J. Campos C, et al. Among authors: garcia cehic d. Sci Rep. 2022 Dec 29;12(1):22571. doi: 10.1038/s41598-022-24918-8. Sci Rep. 2022. PMID: 36581627 Free PMC article.
44 results