Garcia BA - Search Results

1

Roles of H3K27me2 and H3K27me3 Examined during Fate Specification of Embryonic Stem Cells.

Juan AH, Wang S, Ko KD, Zare H, Tsai PF, Feng X, Vivanco KO, Ascoli AM, Gutierrez-Cruz G, Krebs J, Sidoli S, Knight AL, Pedersen RA, Garcia BA, Casellas R, Zou J, Sartorelli V. Juan AH, et al. Among authors: garcia ba. Cell Rep. 2016 Oct 25;17(5):1369-1382. doi: 10.1016/j.celrep.2016.09.087. Cell Rep. 2016. PMID: 27783950 Free PMC article.

2

Asymmetrically modified nucleosomes.

Voigt P, LeRoy G, Drury WJ 3rd, Zee BM, Son J, Beck DB, Young NL, Garcia BA, Reinberg D. Voigt P, et al. Among authors: garcia ba. Cell. 2012 Sep 28;151(1):181-93. doi: 10.1016/j.cell.2012.09.002. Cell. 2012. PMID: 23021224 Free PMC article.

3

Defining heterochromatin in C. elegans through genome-wide analysis of the heterochromatin protein 1 homolog HPL-2.

Garrigues JM, Sidoli S, Garcia BA, Strome S. Garrigues JM, et al. Among authors: garcia ba. Genome Res. 2015 Jan;25(1):76-88. doi: 10.1101/gr.180489.114. Epub 2014 Dec 2. Genome Res. 2015. PMID: 25467431 Free PMC article.

4

Sequential Window Acquisition of all Theoretical Mass Spectra (SWATH) Analysis for Characterization and Quantification of Histone Post-translational Modifications.

Sidoli S, Lin S, Xiong L, Bhanu NV, Karch KR, Johansen E, Hunter C, Mollah S, Garcia BA. Sidoli S, et al. Among authors: garcia ba. Mol Cell Proteomics. 2015 Sep;14(9):2420-8. doi: 10.1074/mcp.O114.046102. Epub 2015 Jan 30. Mol Cell Proteomics. 2015. PMID: 25636311 Free PMC article.

5

Drawbacks in the use of unconventional hydrophobic anhydrides for histone derivatization in bottom-up proteomics PTM analysis.

Sidoli S, Yuan ZF, Lin S, Karch K, Wang X, Bhanu N, Arnaudo AM, Britton LM, Cao XJ, Gonzales-Cope M, Han Y, Liu S, Molden RC, Wein S, Afjehi-Sadat L, Garcia BA. Sidoli S, et al. Among authors: garcia ba. Proteomics. 2015 May;15(9):1459-69. doi: 10.1002/pmic.201400483. Proteomics. 2015. PMID: 25641854 Free PMC article.

6

Bottom-up and middle-down proteomics have comparable accuracies in defining histone post-translational modification relative abundance and stoichiometry.

Sidoli S, Lin S, Karch KR, Garcia BA. Sidoli S, et al. Among authors: garcia ba. Anal Chem. 2015 Mar 17;87(6):3129-33. doi: 10.1021/acs.analchem.5b00072. Epub 2015 Mar 3. Anal Chem. 2015. PMID: 25719549 Free PMC article.

7

EpiProfile Quantifies Histone Peptides With Modifications by Extracting Retention Time and Intensity in High-resolution Mass Spectra.

Yuan ZF, Lin S, Molden RC, Cao XJ, Bhanu NV, Wang X, Sidoli S, Liu S, Garcia BA. Yuan ZF, et al. Among authors: garcia ba. Mol Cell Proteomics. 2015 Jun;14(6):1696-707. doi: 10.1074/mcp.M114.046011. Epub 2015 Mar 24. Mol Cell Proteomics. 2015. PMID: 25805797 Free PMC article.

8

Proteogenomics analysis reveals specific genomic orientations of distal regulatory regions composed by non-canonical histone variants.

Won KJ, Choi I, LeRoy G, Zee BM, Sidoli S, Gonzales-Cope M, Garcia BA. Won KJ, et al. Among authors: garcia ba. Epigenetics Chromatin. 2015 Apr 10;8:13. doi: 10.1186/s13072-015-0005-9. eCollection 2015. Epigenetics Chromatin. 2015. PMID: 25878728 Free PMC article.

9

Properly reading the histone code by MS-based proteomics.

Sidoli S, Garcia BA. Sidoli S, et al. Among authors: garcia ba. Proteomics. 2015 Sep;15(17):2901-2. doi: 10.1002/pmic.201500298. Proteomics. 2015. PMID: 26223514

10

Progress in epigenetic histone modification analysis by mass spectrometry for clinical investigations.

Önder Ö, Sidoli S, Carroll M, Garcia BA. Önder Ö, et al. Among authors: garcia ba. Expert Rev Proteomics. 2015;12(5):499-517. doi: 10.1586/14789450.2015.1084231. Expert Rev Proteomics. 2015. PMID: 26400466 Free PMC article. Review.

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