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SARS-CoV-2 variants of concern surveillance including Omicron using RT-PCR-based genotyping offers comparable performance to whole genome sequencing.
Vanoni S, Matulevicius A, Avdiu B, Scantamburlo G, Ulekleiv C, Brzoska PM, Furtado MR, Feenstra JDM, Rico A, Gandhi M, Giacobazzi E, Masi E, Paulmichl M, Nofziger C. Vanoni S, et al. Among authors: gandhi m. Front Cell Infect Microbiol. 2022 Nov 3;12:960065. doi: 10.3389/fcimb.2022.960065. eCollection 2022. Front Cell Infect Microbiol. 2022. PMID: 36405967 Free PMC article.
A Method for Variant Agnostic Detection of SARS-CoV-2, Rapid Monitoring of Circulating Variants, and Early Detection of Emergent Variants Such as Omicron.
Lai E, Kennedy EB, Lozach J, Hayashibara K, Davis-Turak J, Becker D, Brzoska P, Cassens T, Diamond E, Gandhi M, Greninger AL, Hajian P, Leonetti NA, Nguyen JM, O'Donovan KMC, Peck T, Ramirez JM 3rd, Roychoudhury P, Sandoval E, Wesselman C, Wesselman T, White S, Williams S, Wong D, Yu Y, Creager RS. Lai E, et al. Among authors: gandhi m. J Clin Microbiol. 2022 Jul 20;60(7):e0034222. doi: 10.1128/jcm.00342-22. Epub 2022 Jun 29. J Clin Microbiol. 2022. PMID: 35766514 Free PMC article.
Clinical Performance of Direct RT-PCR Testing of Raw Saliva for Detection of SARS-CoV-2 in Symptomatic and Asymptomatic Individuals.
Castillo-Bravo R, Lucca N, Lai L, Marlborough K, Brychkova G, Sakhteh MS, Lonergan C, O'Grady J, Alikhan NF, Trotter AJ, Page AJ, Smyth B, McKeown PC, Feenstra JDM, Ulekleiv C, Sorel O, Gandhi M, Spillane C. Castillo-Bravo R, et al. Among authors: gandhi m. Microbiol Spectr. 2022 Dec 21;10(6):e0222922. doi: 10.1128/spectrum.02229-22. Epub 2022 Nov 21. Microbiol Spectr. 2022. PMID: 36409097 Free PMC article.
ONE ASSAY TO TEST THEM ALL: COMPARING MULTIPLEX ASSAYS FOR EXPANSION OF RESPIRATORY VIRUS SURVEILLANCE.
Boukli N, Flamand C, Chea KL, Heng L, Keo S, Sour K, In S, Chhim P, Chhor B, Kruy L, Feenstra JDM, Gandhi M, Okafor O, Ulekliev C, Auerswald H, Horm VS, Karlsson EA. Boukli N, et al. Among authors: gandhi m. medRxiv [Preprint]. 2023 Jan 22:2023.01.19.23284806. doi: 10.1101/2023.01.19.23284806. medRxiv. 2023. PMID: 36711477 Free PMC article. Updated. Preprint.
One assay to test them all: Multiplex assays for expansion of respiratory virus surveillance.
Boukli N, Flamand C, Chea KL, Heng L, Keo S, Sour K, In S, Chhim P, Chhor B, Kruy L, Feenstra JDM, Gandhi M, Okafor O, Ulekleiv C, Auerswald H, Horm VS, Karlsson EA. Boukli N, et al. Among authors: gandhi m. Front Med (Lausanne). 2023 Apr 24;10:1161268. doi: 10.3389/fmed.2023.1161268. eCollection 2023. Front Med (Lausanne). 2023. PMID: 37168265 Free PMC article.
Comparison of analytical performance and economic value of two biosurveillance methods for tracking SARS-COV-2 variants of concern.
Pinkhover NP, Pontbriand KM, Fletcher KP, Sanchez E, Okello K, Garvey LM, Pum A, Li K, DeOliveira G, Proctor T, Feenstra JDM, Sorel O, Gandhi M, Auclair JR. Pinkhover NP, et al. Among authors: gandhi m. Microbiol Spectr. 2024 Feb 6;12(2):e0348423. doi: 10.1128/spectrum.03484-23. Epub 2024 Jan 11. Microbiol Spectr. 2024. PMID: 38206048 Free PMC article.
1,340 results