Ganapathiraju MK - Search Results

1

Active machine learning for transmembrane helix prediction.

Osmanbeyoglu HU, Wehner JA, Carbonell JG, Ganapathiraju MK. Osmanbeyoglu HU, et al. Among authors: ganapathiraju mk. BMC Bioinformatics. 2010 Jan 18;11 Suppl 1(Suppl 1):S58. doi: 10.1186/1471-2105-11-S1-S58. BMC Bioinformatics. 2010. PMID: 20122233 Free PMC article.

2

TMpro web server and web service: transmembrane helix prediction through amino acid property analysis.

Ganapathiraju M, Jursa CJ, Karimi HA, Klein-Seetharaman J. Ganapathiraju M, et al. Bioinformatics. 2007 Oct 15;23(20):2795-6. doi: 10.1093/bioinformatics/btm398. Epub 2007 Aug 27. Bioinformatics. 2007. PMID: 17724062 Free PMC article.

3

Transmembrane helix prediction using amino acid property features and latent semantic analysis.

Ganapathiraju M, Balakrishnan N, Reddy R, Klein-Seetharaman J. Ganapathiraju M, et al. BMC Bioinformatics. 2008;9 Suppl 1(Suppl 1):S4. doi: 10.1186/1471-2105-9-S1-S4. BMC Bioinformatics. 2008. PMID: 18315857 Free PMC article.

4

Active learning for human protein-protein interaction prediction.

Mohamed TP, Carbonell JG, Ganapathiraju MK. Mohamed TP, et al. Among authors: ganapathiraju mk. BMC Bioinformatics. 2010 Jan 18;11 Suppl 1(Suppl 1):S57. doi: 10.1186/1471-2105-11-S1-S57. BMC Bioinformatics. 2010. PMID: 20122232 Free PMC article.

5

N-gram analysis of 970 microbial organisms reveals presence of biological language models.

Osmanbeyoglu HU, Ganapathiraju MK. Osmanbeyoglu HU, et al. Among authors: ganapathiraju mk. BMC Bioinformatics. 2011 Jan 10;12:12. doi: 10.1186/1471-2105-12-12. BMC Bioinformatics. 2011. PMID: 21219653 Free PMC article.

6

An efficient heuristic method for active feature acquisition and its application to protein-protein interaction prediction.

Thahir M, Sharma T, Ganapathiraju MK. Thahir M, et al. Among authors: ganapathiraju mk. BMC Proc. 2012 Nov 13;6 Suppl 7(Suppl 7):S2. doi: 10.1186/1753-6561-6-S7-S2. Epub 2012 Nov 13. BMC Proc. 2012. PMID: 23173746 Free PMC article.

7

Suite of tools for statistical N-gram language modeling for pattern mining in whole genome sequences.

Ganapathiraju MK, Mitchell AD, Thahir M, Motwani K, Ananthasubramanian S. Ganapathiraju MK, et al. J Bioinform Comput Biol. 2012 Dec;10(6):1250016. doi: 10.1142/S0219720012500163. Epub 2012 Jul 22. J Bioinform Comput Biol. 2012. PMID: 22817111

8

Benchmark Evaluation of Protein-Protein Interaction Prediction Algorithms.

Dunham B, Ganapathiraju MK. Dunham B, et al. Among authors: ganapathiraju mk. Molecules. 2021 Dec 22;27(1):41. doi: 10.3390/molecules27010041. Molecules. 2021. PMID: 35011283 Free PMC article.

9

Comparison of stability predictions and simulated unfolding of rhodopsin structures.

Tastan O, Yu E, Ganapathiraju M, Aref A, Rader AJ, Klein-Seetharaman J. Tastan O, et al. Photochem Photobiol. 2007 Mar-Apr;83(2):351-62. doi: 10.1562/2006-06-20-RA-942. Photochem Photobiol. 2007. PMID: 17576347

10

Research prioritization through prediction of future impact on biomedical science: a position paper on inference-analytics.

Ganapathiraju MK, Orii N. Ganapathiraju MK, et al. Gigascience. 2013 Aug 30;2(1):11. doi: 10.1186/2047-217X-2-11. Gigascience. 2013. PMID: 24001106 Free PMC article.

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