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Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues.
Meehan CJ, Goig GA, Kohl TA, Verboven L, Dippenaar A, Ezewudo M, Farhat MR, Guthrie JL, Laukens K, Miotto P, Ofori-Anyinam B, Dreyer V, Supply P, Suresh A, Utpatel C, van Soolingen D, Zhou Y, Ashton PM, Brites D, Cabibbe AM, de Jong BC, de Vos M, Menardo F, Gagneux S, Gao Q, Heupink TH, Liu Q, Loiseau C, Rigouts L, Rodwell TC, Tagliani E, Walker TM, Warren RM, Zhao Y, Zignol M, Schito M, Gardy J, Cirillo DM, Niemann S, Comas I, Van Rie A. Meehan CJ, et al. Among authors: gagneux s. Nat Rev Microbiol. 2019 Sep;17(9):533-545. doi: 10.1038/s41579-019-0214-5. Nat Rev Microbiol. 2019. PMID: 31209399 Review.
Genomic analysis distinguishes Mycobacterium africanum.
Mostowy S, Onipede A, Gagneux S, Niemann S, Kremer K, Desmond EP, Kato-Maeda M, Behr M. Mostowy S, et al. Among authors: gagneux s. J Clin Microbiol. 2004 Aug;42(8):3594-9. doi: 10.1128/JCM.42.8.3594-3599.2004. J Clin Microbiol. 2004. PMID: 15297503 Free PMC article.
Variable host-pathogen compatibility in Mycobacterium tuberculosis.
Gagneux S, DeRiemer K, Van T, Kato-Maeda M, de Jong BC, Narayanan S, Nicol M, Niemann S, Kremer K, Gutierrez MC, Hilty M, Hopewell PC, Small PM. Gagneux S, et al. Proc Natl Acad Sci U S A. 2006 Feb 21;103(8):2869-73. doi: 10.1073/pnas.0511240103. Epub 2006 Feb 13. Proc Natl Acad Sci U S A. 2006. PMID: 16477032 Free PMC article.
Use of spoligotyping and large sequence polymorphisms to study the population structure of the Mycobacterium tuberculosis complex in a cohort study of consecutive smear-positive tuberculosis cases in The Gambia.
de Jong BC, Antonio M, Awine T, Ogungbemi K, de Jong YP, Gagneux S, DeRiemer K, Zozio T, Rastogi N, Borgdorff M, Hill PC, Adegbola RA. de Jong BC, et al. Among authors: gagneux s. J Clin Microbiol. 2009 Apr;47(4):994-1001. doi: 10.1128/JCM.01216-08. Epub 2009 Feb 4. J Clin Microbiol. 2009. PMID: 19193842 Free PMC article.
Genomic diversity among drug sensitive and multidrug resistant isolates of Mycobacterium tuberculosis with identical DNA fingerprints.
Niemann S, Köser CU, Gagneux S, Plinke C, Homolka S, Bignell H, Carter RJ, Cheetham RK, Cox A, Gormley NA, Kokko-Gonzales P, Murray LJ, Rigatti R, Smith VP, Arends FP, Cox HS, Smith G, Archer JA. Niemann S, et al. Among authors: gagneux s. PLoS One. 2009 Oct 12;4(10):e7407. doi: 10.1371/journal.pone.0007407. PLoS One. 2009. PMID: 19823582 Free PMC article.
235 results