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COPYCAT: cophylogenetic analysis tool.
Meier-Kolthoff JP, Auch AF, Huson DH, Göker M. Meier-Kolthoff JP, et al. Among authors: goker m. Bioinformatics. 2007 Apr 1;23(7):898-900. doi: 10.1093/bioinformatics/btm027. Epub 2007 Jan 31. Bioinformatics. 2007. PMID: 17267434
The genome sequence of Methanohalophilus mahii SLP(T) reveals differences in the energy metabolism among members of the Methanosarcinaceae inhabiting freshwater and saline environments.
Spring S, Scheuner C, Lapidus A, Lucas S, Glavina Del Rio T, Tice H, Copeland A, Cheng JF, Chen F, Nolan M, Saunders E, Pitluck S, Liolios K, Ivanova N, Mavromatis K, Lykidis A, Pati A, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Goodwin L, Detter JC, Brettin T, Rohde M, Göker M, Woyke T, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Spring S, et al. Among authors: goker m. Archaea. 2010 Dec 23;2010:690737. doi: 10.1155/2010/690737. Archaea. 2010. PMID: 21234345 Free PMC article.
Complete genome sequence of Actinosynnema mirum type strain (101).
Land M, Lapidus A, Mayilraj S, Chen F, Copeland A, Del Rio TG, Nolan M, Lucas S, Tice H, Cheng JF, Chertkov O, Bruce D, Goodwin L, Pitluck S, Rohde M, Göker M, Pati A, Ivanova N, Mavromatis K, Chen A, Palaniappan K, Hauser L, Chang YJ, Jeffries CC, Brettin T, Detter JC, Han C, Chain P, Tindall BJ, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Land M, et al. Among authors: goker m. Stand Genomic Sci. 2009 Jul 20;1(1):46-53. doi: 10.4056/sigs.21137. Stand Genomic Sci. 2009. PMID: 21304636 Free PMC article.
Complete genome sequence of Saccharomonospora viridis type strain (P101).
Pati A, Sikorski J, Nolan M, Lapidus A, Copeland A, Glavina Del Rio T, Lucas S, Chen F, Tice H, Pitluck S, Cheng JF, Chertkov O, Brettin T, Han C, Detter JC, Kuske C, Bruce D, Goodwin L, Chain P, D'haeseleer P, Chen A, Palaniappan K, Ivanova N, Mavromatis K, Mikhailova N, Rohde M, Tindall BJ, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Pati A, et al. Among authors: goker m. Stand Genomic Sci. 2009 Sep 24;1(2):141-9. doi: 10.4056/sigs.20263. Stand Genomic Sci. 2009. PMID: 21304650 Free PMC article.
Complete genome sequence of Halogeometricum borinquense type strain (PR3).
Malfatti S, Tindall BJ, Schneider S, Fähnrich R, Lapidus A, Labuttii K, Copeland A, Glavina Del Rio T, Nolan M, Chen F, Lucas S, Tice H, Cheng JF, Bruce D, Goodwin L, Pitluck S, Anderson I, Pati A, Ivanova N, Mavromatis K, Chen A, Palaniappan K, D'haeseleer P, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Chain P. Malfatti S, et al. Among authors: goker m. Stand Genomic Sci. 2009 Sep 24;1(2):150-9. doi: 10.4056/sigs.23264. Stand Genomic Sci. 2009. PMID: 21304651 Free PMC article.
Complete genome sequence of Halorhabdus utahensis type strain (AX-2).
Anderson I, Tindall BJ, Pomrenke H, Göker M, Lapidus A, Nolan M, Copeland A, Glavina Del Rio T, Chen F, Tice H, Cheng JF, Lucas S, Chertkov O, Bruce D, Brettin T, Detter JC, Han C, Goodwin L, Land M, Hauser L, Chang YJ, Jeffries CD, Pitluck S, Pati A, Mavromatis K, Ivanova N, Ovchinnikova G, Chen A, Palaniappan K, Chain P, Rohde M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP. Anderson I, et al. Among authors: goker m. Stand Genomic Sci. 2009 Nov 22;1(3):218-25. doi: 10.4056/sigs.31864. Stand Genomic Sci. 2009. PMID: 21304660 Free PMC article.
Complete genome sequence of Kangiella koreensis type strain (SW-125).
Han C, Sikorski J, Lapidus A, Nolan M, Glavina Del Rio T, Tice H, Cheng JF, Lucas S, Chen F, Copeland A, Ivanova N, Mavromatis K, Ovchinnikova G, Pati A, Bruce D, Goodwin L, Pitluck S, Chen A, Palaniappan K, Land M, Hauser L, Chang YJ, Jeffries CD, Chain P, Saunders E, Brettin T, Göker M, Tindall BJ, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Kyrpides NC, Klenk HP, Detter JC. Han C, et al. Among authors: goker m. Stand Genomic Sci. 2009 Nov 22;1(3):226-33. doi: 10.4056/sigs.36635. Stand Genomic Sci. 2009. PMID: 21304661 Free PMC article.
Complete genome sequence of Halomicrobium mukohataei type strain (arg-2).
Tindall BJ, Schneider S, Lapidus A, Copeland A, Glavina Del Rio T, Nolan M, Lucas S, Chen F, Tice H, Cheng JF, Saunders E, Bruce D, Goodwin L, Pitluck S, Mikhailova N, Pati A, Ivanova N, Mavrommatis K, Chen A, Palaniappan K, Chain P, Land M, Hauser L, Chang YJ, Jeffries CD, Brettin T, Han C, Rohde M, Göker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC, Detter JC. Tindall BJ, et al. Among authors: goker m. Stand Genomic Sci. 2009 Nov 22;1(3):270-7. doi: 10.4056/sigs.42644. Stand Genomic Sci. 2009. PMID: 21304667 Free PMC article.
369 results