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A comprehensive database for integrated analysis of omics data in autoimmune diseases.
Martorell-Marugán J, López-Domínguez R, García-Moreno A, Toro-Domínguez D, Villatoro-García JA, Barturen G, Martín-Gómez A, Troule K, Gómez-López G, Al-Shahrour F, González-Rumayor V, Peña-Chilet M, Dopazo J, Sáez-Rodríguez J, Alarcón-Riquelme ME, Carmona-Sáez P. Martorell-Marugán J, et al. Among authors: gomez lopez g. BMC Bioinformatics. 2021 Jun 24;22(1):343. doi: 10.1186/s12859-021-04268-4. BMC Bioinformatics. 2021. PMID: 34167460 Free PMC article.
Functional signatures identified in B-cell non-Hodgkin lymphoma profiles.
Aggarwal M, Sánchez-Beato M, Gómez-López G, Al-Shahrour F, Martínez N, Rodríguez A, Ruiz-Ballesteros E, Camacho FI, Pérez-Rosado A, de la Cueva P, Artiga MJ, Pisano DG, Kimby E, Dopazo J, Villuendas R, Piris MA. Aggarwal M, et al. Leuk Lymphoma. 2009 Oct;50(10):1699-708. doi: 10.1080/10428190903189035. Leuk Lymphoma. 2009. PMID: 19863341
Precision medicine needs pioneering clinical bioinformaticians.
Gómez-López G, Dopazo J, Cigudosa JC, Valencia A, Al-Shahrour F. Gómez-López G, et al. Brief Bioinform. 2019 May 21;20(3):752-766. doi: 10.1093/bib/bbx144. Brief Bioinform. 2019. PMID: 29077790 Free article. Review.
vulcanSpot: a tool to prioritize therapeutic vulnerabilities in cancer.
Perales-Patón J, Di Domenico T, Fustero-Torre C, Piñeiro-Yáñez E, Carretero-Puche C, Tejero H, Valencia A, Gómez-López G, Al-Shahrour F. Perales-Patón J, et al. Bioinformatics. 2019 Nov 1;35(22):4846-4848. doi: 10.1093/bioinformatics/btz465. Bioinformatics. 2019. PMID: 31173067 Free PMC article.
DREIMT: a drug repositioning database and prioritization tool for immunomodulation.
Troulé K, López-Fernández H, García-Martín S, Reboiro-Jato M, Carretero-Puche C, Martorell-Marugán J, Martín-Serrano G, Carmona-Sáez P, Glez-Peña D, Al-Shahrour F, Gómez-López G. Troulé K, et al. Bioinformatics. 2021 May 1;37(4):578-579. doi: 10.1093/bioinformatics/btaa727. Bioinformatics. 2021. PMID: 32818254 Free article.
Midkine rewires the melanoma microenvironment toward a tolerogenic and immune-resistant state.
Cerezo-Wallis D, Contreras-Alcalde M, Troulé K, Catena X, Mucientes C, Calvo TG, Cañón E, Tejedo C, Pennacchi PC, Hogan S, Kölblinger P, Tejero H, Chen AX, Ibarz N, Graña-Castro O, Martinez L, Muñoz J, Ortiz-Romero P, Rodriguez-Peralto JL, Gómez-López G, Al-Shahrour F, Rabadán R, Levesque MP, Olmeda D, Soengas MS. Cerezo-Wallis D, et al. Nat Med. 2020 Dec;26(12):1865-1877. doi: 10.1038/s41591-020-1073-3. Epub 2020 Oct 19. Nat Med. 2020. PMID: 33077955
bollito: a flexible pipeline for comprehensive single-cell RNA-seq analyses.
García-Jimeno L, Fustero-Torre C, Jiménez-Santos MJ, Gómez-López G, Di Domenico T, Al-Shahrour F. García-Jimeno L, et al. Among authors: gomez lopez g. Bioinformatics. 2022 Jan 27;38(4):1155-1156. doi: 10.1093/bioinformatics/btab758. Bioinformatics. 2022. PMID: 34788788
107 results