Fromm B - Search Results

1

Unification of miRNA and isomiR research: the mirGFF3 format and the mirtop API.

Desvignes T, Loher P, Eilbeck K, Ma J, Urgese G, Fromm B, Sydes J, Aparicio-Puerta E, Barrera V, Espín R, Thibord F, Bofill-De Ros X, Londin E, Telonis AG, Ficarra E, Friedländer MR, Postlethwait JH, Rigoutsos I, Hackenberg M, Vlachos IS, Halushka MK, Pantano L. Desvignes T, et al. Among authors: fromm b. Bioinformatics. 2020 Feb 1;36(3):698-703. doi: 10.1093/bioinformatics/btz675. Bioinformatics. 2020. PMID: 31504201 Free PMC article.

2

The revised microRNA complement of Fasciola hepatica reveals a plethora of overlooked microRNAs and evidence for enrichment of immuno-regulatory microRNAs in extracellular vesicles.

Fromm B, Trelis M, Hackenberg M, Cantalapiedra F, Bernal D, Marcilla A. Fromm B, et al. Int J Parasitol. 2015 Sep;45(11):697-702. doi: 10.1016/j.ijpara.2015.06.002. Epub 2015 Jul 13. Int J Parasitol. 2015. PMID: 26183562

3

On the presence and immunoregulatory functions of extracellular microRNAs in the trematode Fasciola hepatica.

Fromm B, Ovchinnikov V, Høye E, Bernal D, Hackenberg M, Marcilla A. Fromm B, et al. Parasite Immunol. 2017 Feb;39(2). doi: 10.1111/pim.12399. Parasite Immunol. 2017. PMID: 27809346 Review.

4

Big Strides in Cellular MicroRNA Expression.

Halushka MK, Fromm B, Peterson KJ, McCall MN. Halushka MK, et al. Among authors: fromm b. Trends Genet. 2018 Mar;34(3):165-167. doi: 10.1016/j.tig.2017.12.015. Epub 2018 Jan 18. Trends Genet. 2018. PMID: 29361313 Free PMC article. Review.

5

Human and Cow Have Identical miR-21-5p and miR-30a-5p Sequences, Which Are Likely Unsuited to Study Dietary Uptake from Cow Milk.

Fromm B, Tosar JP, Lu Y, Halushka MK, Witwer KW. Fromm B, et al. J Nutr. 2018 Sep 1;148(9):1506-1507. doi: 10.1093/jn/nxy144. J Nutr. 2018. PMID: 30184228 Free article. No abstract available.

6

Plant microRNAs in human sera are likely contaminants.

Fromm B, Kang W, Rovira C, Cayota A, Witwer K, Friedländer MR, Tosar JP. Fromm B, et al. J Nutr Biochem. 2019 Mar;65:139-140. doi: 10.1016/j.jnutbio.2018.07.019. Epub 2018 Sep 5. J Nutr Biochem. 2019. PMID: 30266285 No abstract available.

7

miRTrace reveals the organismal origins of microRNA sequencing data.

Kang W, Eldfjell Y, Fromm B, Estivill X, Biryukova I, Friedländer MR. Kang W, et al. Among authors: fromm b. Genome Biol. 2018 Dec 4;19(1):213. doi: 10.1186/s13059-018-1588-9. Genome Biol. 2018. PMID: 30514392 Free PMC article.

8

Evolutionary Implications of the microRNA- and piRNA Complement of Lepidodermella squamata (Gastrotricha).

Fromm B, Tosar JP, Aguilera F, Friedländer MR, Bachmann L, Hejnol A. Fromm B, et al. Noncoding RNA. 2019 Feb 22;5(1):19. doi: 10.3390/ncrna5010019. Noncoding RNA. 2019. PMID: 30813358 Free PMC article.

9

sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression.

Aparicio-Puerta E, Lebrón R, Rueda A, Gómez-Martín C, Giannoukakos S, Jaspez D, Medina JM, Zubkovic A, Jurak I, Fromm B, Marchal JA, Oliver J, Hackenberg M. Aparicio-Puerta E, et al. Among authors: fromm b. Nucleic Acids Res. 2019 Jul 2;47(W1):W530-W535. doi: 10.1093/nar/gkz415. Nucleic Acids Res. 2019. PMID: 31114926 Free PMC article.

10

MirGeneDB 2.0: the metazoan microRNA complement.

Fromm B, Domanska D, Høye E, Ovchinnikov V, Kang W, Aparicio-Puerta E, Johansen M, Flatmark K, Mathelier A, Hovig E, Hackenberg M, Friedländer MR, Peterson KJ. Fromm B, et al. Nucleic Acids Res. 2020 Jan 8;48(D1):D132-D141. doi: 10.1093/nar/gkz885. Nucleic Acids Res. 2020. PMID: 31598695 Free PMC article.

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