Flobak Å - Search Results

1

The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST).

Touré V, Vercruysse S, Acencio ML, Lovering RC, Orchard S, Bradley G, Casals-Casas C, Chaouiya C, Del-Toro N, Flobak Å, Gaudet P, Hermjakob H, Hoyt CT, Licata L, Lægreid A, Mungall CJ, Niknejad A, Panni S, Perfetto L, Porras P, Pratt D, Saez-Rodriguez J, Thieffry D, Thomas PD, Türei D, Kuiper M. Touré V, et al. Among authors: flobak a. Bioinformatics. 2021 Apr 5;36(24):5712-5718. doi: 10.1093/bioinformatics/btaa622. Bioinformatics. 2021. PMID: 32637990 Free PMC article.

2

The gastrin and cholecystokinin receptors mediated signaling network: a scaffold for data analysis and new hypotheses on regulatory mechanisms.

Tripathi S, Flobak Å, Chawla K, Baudot A, Bruland T, Thommesen L, Kuiper M, Lægreid A. Tripathi S, et al. Among authors: flobak a. BMC Syst Biol. 2015 Jul 24;9:40. doi: 10.1186/s12918-015-0181-z. BMC Syst Biol. 2015. PMID: 26205660 Free PMC article.

3

Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling.

Flobak Å, Baudot A, Remy E, Thommesen L, Thieffry D, Kuiper M, Lægreid A. Flobak Å, et al. PLoS Comput Biol. 2015 Aug 28;11(8):e1004426. doi: 10.1371/journal.pcbi.1004426. eCollection 2015 Aug. PLoS Comput Biol. 2015. PMID: 26317215 Free PMC article.

4

CImbinator: a web-based tool for drug synergy analysis in small- and large-scale datasets.

Flobak Å, Vazquez M, Lægreid A, Valencia A. Flobak Å, et al. Bioinformatics. 2017 Aug 1;33(15):2410-2412. doi: 10.1093/bioinformatics/btx161. Bioinformatics. 2017. PMID: 28444126 Free PMC article.

User-friendly software solutions that can assist analysis of large-scale datasets are required. RESULTS: CImbinator is a web-service that can aid in batch-wise and in-depth analyzes of data from small-scale and large-scale drug combination screens. ...CONTACT: asmund.fl …

User-friendly software solutions that can assist analysis of large-scale datasets are required. RESULTS: CImbinator is a web-service …

5

A high-throughput drug combination screen of targeted small molecule inhibitors in cancer cell lines.

Flobak Å, Niederdorfer B, Nakstad VT, Thommesen L, Klinkenberg G, Lægreid A. Flobak Å, et al. Sci Data. 2019 Oct 29;6(1):237. doi: 10.1038/s41597-019-0255-7. Sci Data. 2019. PMID: 31664030 Free PMC article.

6

High-throughput screening reveals higher synergistic effect of MEK inhibitor combinations in colon cancer spheroids.

Folkesson E, Niederdorfer B, Nakstad VT, Thommesen L, Klinkenberg G, Lægreid A, Flobak Å. Folkesson E, et al. Among authors: flobak a. Sci Rep. 2020 Jul 14;10(1):11574. doi: 10.1038/s41598-020-68441-0. Sci Rep. 2020. PMID: 32665693 Free PMC article.

7

Strategies to Enhance Logic Modeling-Based Cell Line-Specific Drug Synergy Prediction.

Niederdorfer B, Touré V, Vazquez M, Thommesen L, Kuiper M, Lægreid A, Flobak Å. Niederdorfer B, et al. Among authors: flobak a. Front Physiol. 2020 Jul 28;11:862. doi: 10.3389/fphys.2020.00862. eCollection 2020. Front Physiol. 2020. PMID: 32848834 Free PMC article.

8

A Middle-Out Modeling Strategy to Extend a Colon Cancer Logical Model Improves Drug Synergy Predictions in Epithelial-Derived Cancer Cell Lines.

Tsirvouli E, Touré V, Niederdorfer B, Vázquez M, Flobak Å, Kuiper M. Tsirvouli E, et al. Among authors: flobak a. Front Mol Biosci. 2020 Oct 9;7:502573. doi: 10.3389/fmolb.2020.502573. eCollection 2020. Front Mol Biosci. 2020. PMID: 33195403 Free PMC article.

9

Author Correction: High-throughput screening reveals higher synergistic effect of MEK inhibitor combinations in colon cancer spheroids.

Folkesson E, Niederdorfer B, Nakstad VT, Thommesen L, Klinkenberg G, Lægreid A, Flobak Å. Folkesson E, et al. Among authors: flobak a. Sci Rep. 2020 Nov 25;10(1):20946. doi: 10.1038/s41598-020-77501-4. Sci Rep. 2020. PMID: 33239689 Free PMC article.

10

The status of causality in biological databases: data resources and data retrieval possibilities to support logical modeling.

Touré V, Flobak Å, Niarakis A, Vercruysse S, Kuiper M. Touré V, et al. Among authors: flobak a. Brief Bioinform. 2021 Jul 20;22(4):bbaa390. doi: 10.1093/bib/bbaa390. Brief Bioinform. 2021. PMID: 33378765 Free PMC article.

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