Firek BA - Search Results

1

Using strain-resolved analysis to identify contamination in metagenomics data.

Lou YC, Hoff J, Olm MR, West-Roberts J, Diamond S, Firek BA, Morowitz MJ, Banfield JF. Lou YC, et al. Among authors: firek ba. Microbiome. 2023 Mar 2;11(1):36. doi: 10.1186/s40168-023-01477-2. Microbiome. 2023. PMID: 36864482 Free PMC article.

2

The Staphylococcus aureus cidAB operon: evaluation of its role in regulation of murein hydrolase activity and penicillin tolerance.

Rice KC, Firek BA, Nelson JB, Yang SJ, Patton TG, Bayles KW. Rice KC, et al. Among authors: firek ba. J Bacteriol. 2003 Apr;185(8):2635-43. doi: 10.1128/JB.185.8.2635-2643.2003. J Bacteriol. 2003. PMID: 12670989 Free PMC article.

3

Capsid conformational sampling in HK97 maturation visualized by X-ray crystallography and cryo-EM.

Gan L, Speir JA, Conway JF, Lander G, Cheng N, Firek BA, Hendrix RW, Duda RL, Liljas L, Johnson JE. Gan L, et al. Among authors: firek ba. Structure. 2006 Nov;14(11):1655-65. doi: 10.1016/j.str.2006.09.006. Structure. 2006. PMID: 17098191 Free article.

4

Intestinal epithelial Toll-like receptor 4 regulates goblet cell development and is required for necrotizing enterocolitis in mice.

Sodhi CP, Neal MD, Siggers R, Sho S, Ma C, Branca MF, Prindle T Jr, Russo AM, Afrazi A, Good M, Brower-Sinning R, Firek B, Morowitz MJ, Ozolek JA, Gittes GK, Billiar TR, Hackam DJ. Sodhi CP, et al. Gastroenterology. 2012 Sep;143(3):708-718.e5. doi: 10.1053/j.gastro.2012.05.053. Epub 2012 Jul 13. Gastroenterology. 2012. PMID: 22796522 Free PMC article.

5

Microbes in the neonatal intensive care unit resemble those found in the gut of premature infants.

Brooks B, Firek BA, Miller CS, Sharon I, Thomas BC, Baker R, Morowitz MJ, Banfield JF. Brooks B, et al. Among authors: firek ba. Microbiome. 2014 Jan 28;2(1):1. doi: 10.1186/2049-2618-2-1. Microbiome. 2014. PMID: 24468033 Free PMC article.

6

Acute appendicitis in children is associated with an abundance of bacteria from the phylum Fusobacteria.

Zhong D, Brower-Sinning R, Firek B, Morowitz MJ. Zhong D, et al. J Pediatr Surg. 2014 Mar;49(3):441-6. doi: 10.1016/j.jpedsurg.2013.06.026. J Pediatr Surg. 2014. PMID: 24650474

7

Lactobacillus rhamnosus HN001 decreases the severity of necrotizing enterocolitis in neonatal mice and preterm piglets: evidence in mice for a role of TLR9.

Good M, Sodhi CP, Ozolek JA, Buck RH, Goehring KC, Thomas DL, Vikram A, Bibby K, Morowitz MJ, Firek B, Lu P, Hackam DJ. Good M, et al. Am J Physiol Gastrointest Liver Physiol. 2014 Jun 1;306(11):G1021-32. doi: 10.1152/ajpgi.00452.2013. Epub 2014 Apr 17. Am J Physiol Gastrointest Liver Physiol. 2014. PMID: 24742987 Free PMC article.

8

Mucosa-associated bacterial diversity in necrotizing enterocolitis.

Brower-Sinning R, Zhong D, Good M, Firek B, Baker R, Sodhi CP, Hackam DJ, Morowitz MJ. Brower-Sinning R, et al. PLoS One. 2014 Sep 9;9(9):e105046. doi: 10.1371/journal.pone.0105046. eCollection 2014. PLoS One. 2014. PMID: 25203729 Free PMC article.

9

Gut bacteria are rarely shared by co-hospitalized premature infants, regardless of necrotizing enterocolitis development.

Raveh-Sadka T, Thomas BC, Singh A, Firek B, Brooks B, Castelle CJ, Sharon I, Baker R, Good M, Morowitz MJ, Banfield JF. Raveh-Sadka T, et al. Elife. 2015 Mar 3;4:e05477. doi: 10.7554/eLife.05477. Elife. 2015. PMID: 25735037 Free PMC article.

10

Peroxisome Proliferator-activated Receptor-γ Coactivator 1-α (PGC1α) Protects against Experimental Murine Colitis.

Cunningham KE, Vincent G, Sodhi CP, Novak EA, Ranganathan S, Egan CE, Stolz DB, Rogers MB, Firek B, Morowitz MJ, Gittes GK, Zuckerbraun BS, Hackam DJ, Mollen KP. Cunningham KE, et al. J Biol Chem. 2016 May 6;291(19):10184-200. doi: 10.1074/jbc.M115.688812. Epub 2016 Mar 11. J Biol Chem. 2016. PMID: 26969166 Free PMC article.

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