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Multi-year field trials provide a massive repository of trait data on a highly diverse population of tomato and uncover novel determinants of tomato productivity.
Zemach I, Alseekh S, Tadmor-Levi R, Fisher J, Torgeman S, Trigerman S, Nauen J, Hayut SF, Mann V, Rochsar E, Finkers R, Wendenburg R, Osorio S, Bergmann S, Lunn JE, Semel Y, Hirschberg J, Fernie AR, Zamir D. Zemach I, et al. Among authors: finkers r. Plant J. 2023 Nov;116(4):1136-1151. doi: 10.1111/tpj.16268. Epub 2023 May 21. Plant J. 2023. PMID: 37150955
Diversity and genetic architecture of agro-morphological traits in a core collection of European traditional tomato.
Pons C, Casals J, Brower M, Sacco A, Riccini A, Hendrickx P, Figás MDR, Fisher J, Grandillo S, Mazzucato A, Soler S, Zamir D, Causse M, Díez MJ, Finkers R, Prohens J, Monforte AJ, Granell A. Pons C, et al. Among authors: finkers r. J Exp Bot. 2023 Sep 29;74(18):5896-5916. doi: 10.1093/jxb/erad306. J Exp Bot. 2023. PMID: 37527560 Free PMC article.
BrAPI-an application programming interface for plant breeding applications.
Selby P, Abbeloos R, Backlund JE, Basterrechea Salido M, Bauchet G, Benites-Alfaro OE, Birkett C, Calaminos VC, Carceller P, Cornut G, Vasques Costa B, Edwards JD, Finkers R, Yanxin Gao S, Ghaffar M, Glaser P, Guignon V, Hok P, Kilian A, König P, Lagare JEB, Lange M, Laporte MA, Larmande P, LeBauer DS, Lyon DA, Marshall DS, Matthews D, Milne I, Mistry N, Morales N, Mueller LA, Neveu P, Papoutsoglou E, Pearce B, Perez-Masias I, Pommier C, Ramírez-González RH, Rathore A, Raquel AM, Raubach S, Rife T, Robbins K, Rouard M, Sarma C, Scholz U, Sempéré G, Shaw PD, Simon R, Soldevilla N, Stephen G, Sun Q, Tovar C, Uszynski G, Verouden M; BrAPI consortium. Selby P, et al. Among authors: finkers r. Bioinformatics. 2019 Oct 15;35(20):4147-4155. doi: 10.1093/bioinformatics/btz190. Bioinformatics. 2019. PMID: 30903186 Free PMC article.
Enabling reusability of plant phenomic datasets with MIAPPE 1.1.
Papoutsoglou EA, Faria D, Arend D, Arnaud E, Athanasiadis IN, Chaves I, Coppens F, Cornut G, Costa BV, Ćwiek-Kupczyńska H, Droesbeke B, Finkers R, Gruden K, Junker A, King GJ, Krajewski P, Lange M, Laporte MA, Michotey C, Oppermann M, Ostler R, Poorter H, Ramı Rez-Gonzalez R, Ramšak Ž, Reif JC, Rocca-Serra P, Sansone SA, Scholz U, Tardieu F, Uauy C, Usadel B, Visser RGF, Weise S, Kersey PJ, Miguel CM, Adam-Blondon AF, Pommier C. Papoutsoglou EA, et al. Among authors: finkers r. New Phytol. 2020 Jul;227(1):260-273. doi: 10.1111/nph.16544. Epub 2020 Apr 25. New Phytol. 2020. PMID: 32171029 Free PMC article.
Mapping and characterization of novel parthenocarpy QTLs in tomato.
Gorguet B, Eggink PM, Ocaña J, Tiwari A, Schipper D, Finkers R, Visser RG, van Heusden AW. Gorguet B, et al. Among authors: finkers r. Theor Appl Genet. 2008 Apr;116(6):755-67. doi: 10.1007/s00122-007-0708-9. Epub 2008 Jan 30. Theor Appl Genet. 2008. PMID: 18231773 Free PMC article.
Marker2sequence, mine your QTL regions for candidate genes.
Chibon PY, Schoof H, Visser RG, Finkers R. Chibon PY, et al. Among authors: finkers r. Bioinformatics. 2012 Jul 15;28(14):1921-2. doi: 10.1093/bioinformatics/bts298. Epub 2012 May 23. Bioinformatics. 2012. PMID: 22628524
47 results