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Genomic insights into the secondary aquatic transition of penguins.
Cole TL, Zhou C, Fang M, Pan H, Ksepka DT, Fiddaman SR, Emerling CA, Thomas DB, Bi X, Fang Q, Ellegaard MR, Feng S, Smith AL, Heath TA, Tennyson AJD, Borboroglu PG, Wood JR, Hadden PW, Grosser S, Bost CA, Cherel Y, Mattern T, Hart T, Sinding MS, Shepherd LD, Phillips RA, Quillfeldt P, Masello JF, Bouzat JL, Ryan PG, Thompson DR, Ellenberg U, Dann P, Miller G, Dee Boersma P, Zhao R, Gilbert MTP, Yang H, Zhang DX, Zhang G. Cole TL, et al. Among authors: fiddaman sr. Nat Commun. 2022 Jul 19;13(1):3912. doi: 10.1038/s41467-022-31508-9. Nat Commun. 2022. PMID: 35853876 Free PMC article.
High-coverage genomes to elucidate the evolution of penguins.
Pan H, Cole TL, Bi X, Fang M, Zhou C, Yang Z, Ksepka DT, Hart T, Bouzat JL, Argilla LS, Bertelsen MF, Boersma PD, Bost CA, Cherel Y, Dann P, Fiddaman SR, Howard P, Labuschagne K, Mattern T, Miller G, Parker P, Phillips RA, Quillfeldt P, Ryan PG, Taylor H, Thompson DR, Young MJ, Ellegaard MR, Gilbert MTP, Sinding MS, Pacheco G, Shepherd LD, Tennyson AJD, Grosser S, Kay E, Nupen LJ, Ellenberg U, Houston DM, Reeve AH, Johnson K, Masello JF, Stracke T, McKinlay B, Borboroglu PG, Zhang DX, Zhang G. Pan H, et al. Among authors: fiddaman sr. Gigascience. 2019 Sep 1;8(9):giz117. doi: 10.1093/gigascience/giz117. Gigascience. 2019. PMID: 31531675 Free PMC article.
Receding ice drove parallel expansions in Southern Ocean penguins.
Cole TL, Dutoit L, Dussex N, Hart T, Alexander A, Younger JL, Clucas GV, Frugone MJ, Cherel Y, Cuthbert R, Ellenberg U, Fiddaman SR, Hiscock J, Houston D, Jouventin P, Mattern T, Miller G, Miskelly C, Nolan P, Polito MJ, Quillfeldt P, Ryan PG, Smith A, Tennyson AJD, Thompson D, Wienecke B, Vianna JA, Waters JM. Cole TL, et al. Among authors: fiddaman sr. Proc Natl Acad Sci U S A. 2019 Dec 26;116(52):26690-26696. doi: 10.1073/pnas.1904048116. Epub 2019 Dec 16. Proc Natl Acad Sci U S A. 2019. PMID: 31843914 Free PMC article.
Evidence of Pathogen-Induced Immunogenetic Selection across the Large Geographic Range of a Wild Seabird.
Levy H, Fiddaman SR, Vianna JA, Noll D, Clucas GV, Sidhu JKH, Polito MJ, Bost CA, Phillips RA, Crofts S, Miller GD, Pistorius P, Bonnadonna F, Le Bohec C, Barbosa A, Trathan P, Raya Rey A, Frantz LAF, Hart T, Smith AL. Levy H, et al. Among authors: fiddaman sr. Mol Biol Evol. 2020 Jun 1;37(6):1708-1726. doi: 10.1093/molbev/msaa040. Mol Biol Evol. 2020. PMID: 32096861 Free PMC article.
Correction to: High-coverage genomes to elucidate the evolution of penguins.
Pan H, Cole TL, Bi X, Fang M, Zhou C, Yang Z, Ksepka DT, Hart T, Bouzat JL, Argilla LS, Bertelsen MF, Boersma PD, Bost CA, Cherel Y, Dann P, Fiddaman SR, Howard P, Labuschagne K, Mattern T, Miller G, Parker P, Phillips RA, Quillfeldt P, Ryan PG, Taylor H, Thompson DR, Young MJ, Ellegaard MR, Gilbert MTP, Sinding MS, Pacheco G, Shepherd LD, Tennyson AJD, Grosser S, Kay E, Nupen LJ, Ellenberg U, Houston DM, Reeve AH, Johnson K, Masello JF, Stracke T, McKinlay B, Garc Ia Borboroglu P, Zhang DX, Zhang G. Pan H, et al. Among authors: fiddaman sr. Gigascience. 2020 Mar 1;9(3):giaa031. doi: 10.1093/gigascience/giaa031. Gigascience. 2020. PMID: 32191810 Free PMC article. No abstract available.
Repertoire analysis of γδ T cells in the chicken enables functional annotation of the genomic region revealing highly variable pan-tissue TCR gamma V gene usage as well as identifying public and private repertoires.
Dixon R, Preston SG, Dascalu S, Flammer PG, Fiddaman SR, McLoughlin K, Boyd A, Volf J, Rychlik I, Bonsall MB, Kaspers B, Smith AL. Dixon R, et al. Among authors: fiddaman sr. BMC Genomics. 2021 Oct 6;22(1):719. doi: 10.1186/s12864-021-08036-9. BMC Genomics. 2021. PMID: 34610803 Free PMC article.
Adaptation and Cryptic Pseudogenization in Penguin Toll-Like Receptors.
Fiddaman SR, Vinkler M, Spiro SG, Levy H, Emerling CA, Boyd AC, Dimopoulos EA, Vianna JA, Cole TL, Pan H, Fang M, Zhang G, Hart T, Frantz LAF, Smith AL. Fiddaman SR, et al. Mol Biol Evol. 2022 Jan 7;39(1):msab354. doi: 10.1093/molbev/msab354. Mol Biol Evol. 2022. PMID: 34897511 Free PMC article.
17 results