Ficklin SP - Search Results

1

Chromosomal characteristics of salt stress heritable gene expression in the rice genome.

McGowan MT, Zhang Z, Ficklin SP. McGowan MT, et al. Among authors: ficklin sp. BMC Genom Data. 2021 May 27;22(1):17. doi: 10.1186/s12863-021-00970-7. BMC Genom Data. 2021. PMID: 34044788 Free PMC article.

2

Addressing noise in co-expression network construction.

Burns JJR, Shealy BT, Greer MS, Hadish JA, McGowan MT, Biggs T, Smith MC, Feltus FA, Ficklin SP. Burns JJR, et al. Among authors: ficklin sp. Brief Bioinform. 2022 Jan 17;23(1):bbab495. doi: 10.1093/bib/bbab495. Brief Bioinform. 2022. PMID: 34850822 Free PMC article. Review.

3

The association of multiple interacting genes with specific phenotypes in rice using gene coexpression networks.

Ficklin SP, Luo F, Feltus FA. Ficklin SP, et al. Plant Physiol. 2010 Sep;154(1):13-24. doi: 10.1104/pp.110.159459. Epub 2010 Jul 28. Plant Physiol. 2010. PMID: 20668062 Free PMC article.

4

Gene coexpression network alignment and conservation of gene modules between two grass species: maize and rice.

Ficklin SP, Feltus FA. Ficklin SP, et al. Plant Physiol. 2011 Jul;156(3):1244-56. doi: 10.1104/pp.111.173047. Epub 2011 May 23. Plant Physiol. 2011. PMID: 21606319 Free PMC article.

5

A systems-genetics approach and data mining tool to assist in the discovery of genes underlying complex traits in Oryza sativa.

Ficklin SP, Feltus FA. Ficklin SP, et al. PLoS One. 2013 Jul 16;8(7):e68551. doi: 10.1371/journal.pone.0068551. Print 2013. PLoS One. 2013. PMID: 23874666 Free PMC article.

6

The Genome Database for Rosaceae (GDR): year 10 update.

Jung S, Ficklin SP, Lee T, Cheng CH, Blenda A, Zheng P, Yu J, Bombarely A, Cho I, Ru S, Evans K, Peace C, Abbott AG, Mueller LA, Olmstead MA, Main D. Jung S, et al. Among authors: ficklin sp. Nucleic Acids Res. 2014 Jan;42(Database issue):D1237-44. doi: 10.1093/nar/gkt1012. Epub 2013 Nov 12. Nucleic Acids Res. 2014. PMID: 24225320 Free PMC article.

7

Chado use case: storing genomic, genetic and breeding data of Rosaceae and Gossypium crops in Chado.

Jung S, Lee T, Ficklin S, Yu J, Cheng CH, Main D. Jung S, et al. Database (Oxford). 2016 Mar 17;2016:baw010. doi: 10.1093/database/baw010. Print 2016. Database (Oxford). 2016. PMID: 26989146 Free PMC article.

8

Discovering Condition-Specific Gene Co-Expression Patterns Using Gaussian Mixture Models: A Cancer Case Study.

Ficklin SP, Dunwoodie LJ, Poehlman WL, Watson C, Roche KE, Feltus FA. Ficklin SP, et al. Sci Rep. 2017 Aug 17;7(1):8617. doi: 10.1038/s41598-017-09094-4. Sci Rep. 2017. PMID: 28819158 Free PMC article.

9

Tripal MapViewer: A tool for interactive visualization and comparison of genetic maps.

Buble K, Jung S, Humann JL, Yu J, Cheng CH, Lee T, Ficklin SP, Hough H, Condon B, Staton ME, Wegrzyn JL, Main D. Buble K, et al. Among authors: ficklin sp. Database (Oxford). 2019 Jan 1;2019:baz100. doi: 10.1093/database/baz100. Database (Oxford). 2019. PMID: 31688940 Free PMC article.

10

Dissecting the Genetic Architecture of Aphanomyces Root Rot Resistance in Lentil by QTL Mapping and Genome-Wide Association Study.

Ma Y, Marzougui A, Coyne CJ, Sankaran S, Main D, Porter LD, Mugabe D, Smitchger JA, Zhang C, Amin MN, Rasheed N, Ficklin SP, McGee RJ. Ma Y, et al. Among authors: ficklin sp. Int J Mol Sci. 2020 Mar 20;21(6):2129. doi: 10.3390/ijms21062129. Int J Mol Sci. 2020. PMID: 32244875 Free PMC article.

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