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Time to evaluate COVID-19 contact-tracing apps.
Colizza V, Grill E, Mikolajczyk R, Cattuto C, Kucharski A, Riley S, Kendall M, Lythgoe K, Bonsall D, Wymant C, Abeler-Dörner L, Ferretti L, Fraser C. Colizza V, et al. Among authors: ferretti l. Nat Med. 2021 Mar;27(3):361-362. doi: 10.1038/s41591-021-01236-6. Nat Med. 2021. PMID: 33589822 No abstract available.
SARS-CoV-2 within-host diversity and transmission.
Lythgoe KA, Hall M, Ferretti L, de Cesare M, MacIntyre-Cockett G, Trebes A, Andersson M, Otecko N, Wise EL, Moore N, Lynch J, Kidd S, Cortes N, Mori M, Williams R, Vernet G, Justice A, Green A, Nicholls SM, Ansari MA, Abeler-Dörner L, Moore CE, Peto TEA, Eyre DW, Shaw R, Simmonds P, Buck D, Todd JA; Oxford Virus Sequencing Analysis Group (OVSG); Connor TR, Ashraf S, da Silva Filipe A, Shepherd J, Thomson EC; COVID-19 Genomics UK (COG-UK) Consortium; Bonsall D, Fraser C, Golubchik T. Lythgoe KA, et al. Among authors: ferretti l. Science. 2021 Apr 16;372(6539):eabg0821. doi: 10.1126/science.abg0821. Epub 2021 Mar 9. Science. 2021. PMID: 33688063 Free PMC article.
The epidemiological impact of the NHS COVID-19 app.
Wymant C, Ferretti L, Tsallis D, Charalambides M, Abeler-Dörner L, Bonsall D, Hinch R, Kendall M, Milsom L, Ayres M, Holmes C, Briers M, Fraser C. Wymant C, et al. Among authors: ferretti l. Nature. 2021 Jun;594(7863):408-412. doi: 10.1038/s41586-021-03606-z. Epub 2021 May 12. Nature. 2021. PMID: 33979832
OpenABM-Covid19-An agent-based model for non-pharmaceutical interventions against COVID-19 including contact tracing.
Hinch R, Probert WJM, Nurtay A, Kendall M, Wymant C, Hall M, Lythgoe K, Bulas Cruz A, Zhao L, Stewart A, Ferretti L, Montero D, Warren J, Mather N, Abueg M, Wu N, Legat O, Bentley K, Mead T, Van-Vuuren K, Feldner-Busztin D, Ristori T, Finkelstein A, Bonsall DG, Abeler-Dörner L, Fraser C. Hinch R, et al. Among authors: ferretti l. PLoS Comput Biol. 2021 Jul 12;17(7):e1009146. doi: 10.1371/journal.pcbi.1009146. eCollection 2021 Jul. PLoS Comput Biol. 2021. PMID: 34252083 Free PMC article.
A highly virulent variant of HIV-1 circulating in the Netherlands.
Wymant C, Bezemer D, Blanquart F, Ferretti L, Gall A, Hall M, Golubchik T, Bakker M, Ong SH, Zhao L, Bonsall D, de Cesare M, MacIntyre-Cockett G, Abeler-Dörner L, Albert J, Bannert N, Fellay J, Grabowski MK, Gunsenheimer-Bartmeyer B, Günthard HF, Kivelä P, Kouyos RD, Laeyendecker O, Meyer L, Porter K, Ristola M, van Sighem A, Berkhout B, Kellam P, Cornelissen M, Reiss P, Fraser C; Netherlands ATHENA HIV Observational Cohort†; BEEHIVE Collaboration†. Wymant C, et al. Among authors: ferretti l. Science. 2022 Feb 4;375(6580):540-545. doi: 10.1126/science.abk1688. Epub 2022 Feb 3. Science. 2022. PMID: 35113714 Free article.
Phylogenetic estimation of the viral fitness landscape of HIV-1 set-point viral load.
Zhao L, Wymant C, Blanquart F, Golubchik T, Gall A, Bakker M, Bezemer D, Hall M, Ong SH, Albert J, Bannert N, Fellay J, Grabowski MK, Gunsenheimer-Bartmeyer B, Günthard HF, Kivelä P, Kouyos RD, Laeyendecker O, Meyer L, Porter K, van Sighem A, van der Valk M, Berkhout B, Kellam P, Cornelissen M, Reiss P, Fraser C, Ferretti L. Zhao L, et al. Among authors: ferretti l. Virus Evol. 2022 Mar 16;8(1):veac022. doi: 10.1093/ve/veac022. eCollection 2022. Virus Evol. 2022. PMID: 35402002 Free PMC article.
Statistical and agent-based modelling of the transmissibility of different SARS-CoV-2 variants in England and impact of different interventions.
Panovska-Griffiths J, Swallow B, Hinch R, Cohen J, Rosenfeld K, Stuart RM, Ferretti L, Di Lauro F, Wymant C, Izzo A, Waites W, Viner R, Bonell C, Fraser C, Klein D, Kerr CC; COVID-19 Genomics UK (COG-UK) Consortium. Panovska-Griffiths J, et al. Among authors: ferretti l. Philos Trans A Math Phys Eng Sci. 2022 Oct 3;380(2233):20210315. doi: 10.1098/rsta.2021.0315. Epub 2022 Aug 15. Philos Trans A Math Phys Eng Sci. 2022. PMID: 35965458 Free PMC article.
265 results