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Population genomics from pool sequencing.
Ferretti L, Ramos-Onsins SE, Pérez-Enciso M. Ferretti L, et al. Mol Ecol. 2013 Nov;22(22):5561-76. doi: 10.1111/mec.12522. Epub 2013 Oct 28. Mol Ecol. 2013. PMID: 24102736
PRDM9 Diversity at Fine Geographical Scale Reveals Contrasting Evolutionary Patterns and Functional Constraints in Natural Populations of House Mice.
Vara C, Capilla L, Ferretti L, Ledda A, Sánchez-Guillén RA, Gabriel SI, Albert-Lizandra G, Florit-Sabater B, Bello-Rodríguez J, Ventura J, Searle JB, Mathias ML, Ruiz-Herrera A. Vara C, et al. Among authors: ferretti l. Mol Biol Evol. 2019 Aug 1;36(8):1686-1700. doi: 10.1093/molbev/msz091. Mol Biol Evol. 2019. PMID: 31004162 Free PMC article.
Optimal neutrality tests based on the frequency spectrum.
Ferretti L, Perez-Enciso M, Ramos-Onsins S. Ferretti L, et al. Genetics. 2010 Sep;186(1):353-65. doi: 10.1534/genetics.110.118570. Epub 2010 Jul 6. Genetics. 2010. PMID: 20610408 Free PMC article.
Neutrality tests for sequences with missing data.
Ferretti L, Raineri E, Ramos-Onsins S. Ferretti L, et al. Genetics. 2012 Aug;191(4):1397-401. doi: 10.1534/genetics.112.139949. Epub 2012 Jun 1. Genetics. 2012. PMID: 22661328 Free PMC article.
SNP calling by sequencing pooled samples.
Raineri E, Ferretti L, Esteve-Codina A, Nevado B, Heath S, Pérez-Enciso M. Raineri E, et al. Among authors: ferretti l. BMC Bioinformatics. 2012 Sep 20;13:239. doi: 10.1186/1471-2105-13-239. BMC Bioinformatics. 2012. PMID: 22992255 Free PMC article.
Dissecting structural and nucleotide genome-wide variation in inbred Iberian pigs.
Esteve-Codina A, Paudel Y, Ferretti L, Raineri E, Megens HJ, Silió L, Rodríguez MC, Groenen MA, Ramos-Onsins SE, Pérez-Enciso M. Esteve-Codina A, et al. Among authors: ferretti l. BMC Genomics. 2013 Mar 5;14:148. doi: 10.1186/1471-2164-14-148. BMC Genomics. 2013. PMID: 23497037 Free PMC article.
265 results