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Blueberry and cranberry pangenomes as a resource for future genetic studies and breeding efforts.
Yocca AE, Platts A, Alger E, Teresi S, Mengist MF, Benevenuto J, Ferrão LFV, Jacobs M, Babinski M, Magallanes-Lundback M, Bayer P, Golicz A, Humann JL, Main D, Espley RV, Chagné D, Albert NW, Montanari S, Vorsa N, Polashock J, Díaz-Garcia L, Zalapa J, Bassil NV, Munoz PR, Iorizzo M, Edger PP. Yocca AE, et al. Among authors: ferrao lfv. Hortic Res. 2023 Oct 10;10(11):uhad202. doi: 10.1093/hr/uhad202. eCollection 2023 Nov. Hortic Res. 2023. PMID: 38023484 Free PMC article.
There and back again; historical perspective and future directions for Vaccinium breeding and research studies.
Edger PP, Iorizzo M, Bassil NV, Benevenuto J, Ferrão LFV, Giongo L, Hummer K, Lawas LMF, Leisner CP, Li C, Munoz PR, Ashrafi H, Atucha A, Babiker EM, Canales E, Chagné D, DeVetter L, Ehlenfeldt M, Espley RV, Gallardo K, Günther CS, Hardigan M, Hulse-Kemp AM, Jacobs M, Lila MA, Luby C, Main D, Mengist MF, Owens GL, Perkins-Veazie P, Polashock J, Pottorff M, Rowland LJ, Sims CA, Song GQ, Spencer J, Vorsa N, Yocca AE, Zalapa J. Edger PP, et al. Among authors: ferrao lfv. Hortic Res. 2022 Apr 11;9:uhac083. doi: 10.1093/hr/uhac083. eCollection 2022. Hortic Res. 2022. PMID: 35611183 Free PMC article.
How can a high-quality genome assembly help plant breeders?
Benevenuto J, Ferrão LFV, Amadeu RR, Munoz P. Benevenuto J, et al. Among authors: ferrao lfv. Gigascience. 2019 Jun 1;8(6):giz068. doi: 10.1093/gigascience/giz068. Gigascience. 2019. PMID: 31184361 Free PMC article.
AGHmatrix: genetic relationship matrices in R.
Amadeu RR, Garcia AAF, Munoz PR, Ferrão LFV. Amadeu RR, et al. Among authors: ferrao lfv. Bioinformatics. 2023 Jul 1;39(7):btad445. doi: 10.1093/bioinformatics/btad445. Bioinformatics. 2023. PMID: 37471595 Free PMC article.
23 results