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Plant Single-Cell/Nucleus RNA-seq Workflow.
Thibivilliers S, Farmer A, Schroeder S, Libault M. Thibivilliers S, et al. Methods Mol Biol. 2023;2584:165-181. doi: 10.1007/978-1-0716-2756-3_6. Methods Mol Biol. 2023. PMID: 36495448
The Medicago Genome Initiative: a model legume database.
Bell CJ, Dixon RA, Farmer AD, Flores R, Inman J, Gonzales RA, Harrison MJ, Paiva NL, Scott AD, Weller JW, May GD. Bell CJ, et al. Among authors: farmer ad. Nucleic Acids Res. 2001 Jan 1;29(1):114-7. doi: 10.1093/nar/29.1.114. Nucleic Acids Res. 2001. PMID: 11125064 Free PMC article.
A gapless genome sequence of the fungus Botrytis cinerea.
Van Kan JA, Stassen JH, Mosbach A, Van Der Lee TA, Faino L, Farmer AD, Papasotiriou DG, Zhou S, Seidl MF, Cottam E, Edel D, Hahn M, Schwartz DC, Dietrich RA, Widdison S, Scalliet G. Van Kan JA, et al. Among authors: farmer ad. Mol Plant Pathol. 2017 Jan;18(1):75-89. doi: 10.1111/mpp.12384. Epub 2016 Jun 9. Mol Plant Pathol. 2017. PMID: 26913498 Free PMC article.
Transcriptome and metabolite profiling of the infection cycle of Zymoseptoria tritici on wheat reveals a biphasic interaction with plant immunity involving differential pathogen chromosomal contributions and a variation on the hemibiotrophic lifestyle definition.
Rudd JJ, Kanyuka K, Hassani-Pak K, Derbyshire M, Andongabo A, Devonshire J, Lysenko A, Saqi M, Desai NM, Powers SJ, Hooper J, Ambroso L, Bharti A, Farmer A, Hammond-Kosack KE, Dietrich RA, Courbot M. Rudd JJ, et al. Plant Physiol. 2015 Mar;167(3):1158-85. doi: 10.1104/pp.114.255927. Epub 2015 Jan 16. Plant Physiol. 2015. PMID: 25596183 Free PMC article.
A view of the pan-genome of domesticated Cowpea (Vigna unguiculata [L.] Walp.).
Liang Q, Muñoz-Amatriaín M, Shu S, Lo S, Wu X, Carlson JW, Davidson P, Goodstein DM, Phillips J, Janis NM, Lee EJ, Liang C, Morrell PL, Farmer AD, Xu P, Close TJ, Lonardi S. Liang Q, et al. Among authors: farmer ad. Plant Genome. 2024 Mar;17(1):e20319. doi: 10.1002/tpg2.20319. Epub 2023 Mar 22. Plant Genome. 2024. PMID: 36946261 Free article.
Data sharing and ontology use among agricultural genetics, genomics, and breeding databases and resources of the Agbiodata Consortium.
Clarke JL, Cooper LD, Poelchau MF, Berardini TZ, Elser J, Farmer AD, Ficklin S, Kumari S, Laporte MA, Nelson RT, Sadohara R, Selby P, Thessen AE, Whitehead B, Sen TZ. Clarke JL, et al. Among authors: farmer ad. Database (Oxford). 2023 Nov 15;2023:baad076. doi: 10.1093/database/baad076. Database (Oxford). 2023. PMID: 37971715 Free PMC article.
The Genome Sequence DataBase: towards an integrated functional genomics resource.
Skupski MP, Booker M, Farmer A, Harpold M, Huang W, Inman J, Kiphart D, Kodira C, Root S, Schilkey F, Schwertfeger J, Siepel A, Stamper D, Thayer N, Thompson R, Wortman J, Zhuang JJ, Harger C. Skupski MP, et al. Nucleic Acids Res. 1999 Jan 1;27(1):35-8. doi: 10.1093/nar/27.1.35. Nucleic Acids Res. 1999. PMID: 9847136 Free PMC article.
205 results