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Page 1
The Medical Segmentation Decathlon.
Antonelli M, Reinke A, Bakas S, Farahani K, Kopp-Schneider A, Landman BA, Litjens G, Menze B, Ronneberger O, Summers RM, van Ginneken B, Bilello M, Bilic P, Christ PF, Do RKG, Gollub MJ, Heckers SH, Huisman H, Jarnagin WR, McHugo MK, Napel S, Pernicka JSG, Rhode K, Tobon-Gomez C, Vorontsov E, Meakin JA, Ourselin S, Wiesenfarth M, Arbeláez P, Bae B, Chen S, Daza L, Feng J, He B, Isensee F, Ji Y, Jia F, Kim I, Maier-Hein K, Merhof D, Pai A, Park B, Perslev M, Rezaiifar R, Rippel O, Sarasua I, Shen W, Son J, Wachinger C, Wang L, Wang Y, Xia Y, Xu D, Xu Z, Zheng Y, Simpson AL, Maier-Hein L, Cardoso MJ. Antonelli M, et al. Among authors: farahani k. Nat Commun. 2022 Jul 15;13(1):4128. doi: 10.1038/s41467-022-30695-9. Nat Commun. 2022. PMID: 35840566 Free PMC article.
Segmentation and Classification in Digital Pathology for Glioma Research: Challenges and Deep Learning Approaches.
Kurc T, Bakas S, Ren X, Bagari A, Momeni A, Huang Y, Zhang L, Kumar A, Thibault M, Qi Q, Wang Q, Kori A, Gevaert O, Zhang Y, Shen D, Khened M, Ding X, Krishnamurthi G, Kalpathy-Cramer J, Davis J, Zhao T, Gupta R, Saltz J, Farahani K. Kurc T, et al. Among authors: farahani k. Front Neurosci. 2020 Feb 21;14:27. doi: 10.3389/fnins.2020.00027. eCollection 2020. Front Neurosci. 2020. PMID: 32153349 Free PMC article.
Standardization in Quantitative Imaging: A Multicenter Comparison of Radiomic Features from Different Software Packages on Digital Reference Objects and Patient Data Sets.
McNitt-Gray M, Napel S, Jaggi A, Mattonen SA, Hadjiiski L, Muzi M, Goldgof D, Balagurunathan Y, Pierce LA, Kinahan PE, Jones EF, Nguyen A, Virkud A, Chan HP, Emaminejad N, Wahi-Anwar M, Daly M, Abdalah M, Yang H, Lu L, Lv W, Rahmim A, Gastounioti A, Pati S, Bakas S, Kontos D, Zhao B, Kalpathy-Cramer J, Farahani K. McNitt-Gray M, et al. Among authors: farahani k. Tomography. 2020 Jun;6(2):118-128. doi: 10.18383/j.tom.2019.00031. Tomography. 2020. PMID: 32548288 Free PMC article.
PROSTATEx Challenges for computerized classification of prostate lesions from multiparametric magnetic resonance images.
Armato SG 3rd, Huisman H, Drukker K, Hadjiiski L, Kirby JS, Petrick N, Redmond G, Giger ML, Cha K, Mamonov A, Kalpathy-Cramer J, Farahani K. Armato SG 3rd, et al. Among authors: farahani k. J Med Imaging (Bellingham). 2018 Oct;5(4):044501. doi: 10.1117/1.JMI.5.4.044501. Epub 2018 Nov 10. J Med Imaging (Bellingham). 2018. PMID: 30840739 Free PMC article.
Methods for Segmentation and Classification of Digital Microscopy Tissue Images.
Vu QD, Graham S, Kurc T, To MNN, Shaban M, Qaiser T, Koohbanani NA, Khurram SA, Kalpathy-Cramer J, Zhao T, Gupta R, Kwak JT, Rajpoot N, Saltz J, Farahani K. Vu QD, et al. Among authors: farahani k. Front Bioeng Biotechnol. 2019 Apr 2;7:53. doi: 10.3389/fbioe.2019.00053. eCollection 2019. Front Bioeng Biotechnol. 2019. PMID: 31001524 Free PMC article.
A DICOM dataset for evaluation of medical image de-identification.
Rutherford M, Mun SK, Levine B, Bennett W, Smith K, Farmer P, Jarosz Q, Wagner U, Freyman J, Blake G, Tarbox L, Farahani K, Prior F. Rutherford M, et al. Among authors: farahani k. Sci Data. 2021 Jul 16;8(1):183. doi: 10.1038/s41597-021-00967-y. Sci Data. 2021. PMID: 34272388 Free PMC article.
Deep Learning for Lung Cancer Detection on Screening CT Scans: Results of a Large-Scale Public Competition and an Observer Study with 11 Radiologists.
Jacobs C, Setio AAA, Scholten ET, Gerke PK, Bhattacharya H, M Hoesein FA, Brink M, Ranschaert E, de Jong PA, Silva M, Geurts B, Chung K, Schalekamp S, Meersschaert J, Devaraj A, Pinsky PF, Lam SC, van Ginneken B, Farahani K. Jacobs C, et al. Among authors: farahani k. Radiol Artif Intell. 2021 Oct 27;3(6):e210027. doi: 10.1148/ryai.2021210027. eCollection 2021 Nov. Radiol Artif Intell. 2021. PMID: 34870218 Free PMC article.
Challenges in clinical prostate cancer: role of imaging.
Kelloff GJ, Choyke P, Coffey DS; Prostate Cancer Imaging Working Group. Kelloff GJ, et al. AJR Am J Roentgenol. 2009 Jun;192(6):1455-70. doi: 10.2214/AJR.09.2579. AJR Am J Roentgenol. 2009. PMID: 19457806 Free PMC article.
Autosegmentation for thoracic radiation treatment planning: A grand challenge at AAPM 2017.
Yang J, Veeraraghavan H, Armato SG 3rd, Farahani K, Kirby JS, Kalpathy-Kramer J, van Elmpt W, Dekker A, Han X, Feng X, Aljabar P, Oliveira B, van der Heyden B, Zamdborg L, Lam D, Gooding M, Sharp GC. Yang J, et al. Among authors: farahani k. Med Phys. 2018 Oct;45(10):4568-4581. doi: 10.1002/mp.13141. Epub 2018 Sep 19. Med Phys. 2018. PMID: 30144101 Free PMC article.
100 results