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The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS).
Menze BH, Jakab A, Bauer S, Kalpathy-Cramer J, Farahani K, Kirby J, Burren Y, Porz N, Slotboom J, Wiest R, Lanczi L, Gerstner E, Weber MA, Arbel T, Avants BB, Ayache N, Buendia P, Collins DL, Cordier N, Corso JJ, Criminisi A, Das T, Delingette H, Demiralp Ç, Durst CR, Dojat M, Doyle S, Festa J, Forbes F, Geremia E, Glocker B, Golland P, Guo X, Hamamci A, Iftekharuddin KM, Jena R, John NM, Konukoglu E, Lashkari D, Mariz JA, Meier R, Pereira S, Precup D, Price SJ, Raviv TR, Reza SM, Ryan M, Sarikaya D, Schwartz L, Shin HC, Shotton J, Silva CA, Sousa N, Subbanna NK, Szekely G, Taylor TJ, Thomas OM, Tustison NJ, Unal G, Vasseur F, Wintermark M, Ye DH, Zhao L, Zhao B, Zikic D, Prastawa M, Reyes M, Van Leemput K. Menze BH, et al. Among authors: farahani k. IEEE Trans Med Imaging. 2015 Oct;34(10):1993-2024. doi: 10.1109/TMI.2014.2377694. Epub 2014 Dec 4. IEEE Trans Med Imaging. 2015. PMID: 25494501 Free PMC article. Review.
Multi-parametric MRI Assessment of Tumor Response to High-Intensity Focused Ultrasound in a Rat Glioma Model.
Zhang Y, Lee DH, Zhang K, Mangraviti A, Yang C, Heo HY, Tyler B, Partanen A, Farahani K, Bottomley P, van Zijl P, Zhou J. Zhang Y, et al. Among authors: farahani k. Proc Int Soc Magn Reson Med Sci Meet Exhib Int Soc Magn Reson Med Sci Meet Exhib. 2015 May-Jun;2015:0036. Proc Int Soc Magn Reson Med Sci Meet Exhib Int Soc Magn Reson Med Sci Meet Exhib. 2015. PMID: 27199614 Free PMC article. No abstract available.
PROSTATEx Challenges for computerized classification of prostate lesions from multiparametric magnetic resonance images.
Armato SG 3rd, Huisman H, Drukker K, Hadjiiski L, Kirby JS, Petrick N, Redmond G, Giger ML, Cha K, Mamonov A, Kalpathy-Cramer J, Farahani K. Armato SG 3rd, et al. Among authors: farahani k. J Med Imaging (Bellingham). 2018 Oct;5(4):044501. doi: 10.1117/1.JMI.5.4.044501. Epub 2018 Nov 10. J Med Imaging (Bellingham). 2018. PMID: 30840739 Free PMC article.
Lung Nodule Malignancy Prediction in Sequential CT Scans: Summary of ISBI 2018 Challenge.
Balagurunathan Y, Beers A, Mcnitt-Gray M, Hadjiiski L, Napel S, Goldgof D, Perez G, Arbelaez P, Mehrtash A, Kapur T, Yang E, Moon JW, Perez GB, Delgado-Gonzalo R, Farhangi MM, Amini AA, Ni R, Feng X, Bagari A, Vaidhya K, Veasey B, Safta W, Frigui H, Enguehard J, Gholipour A, Castillo LS, Daza LA, Pinsky P, Kalpathy-Cramer J, Farahani K. Balagurunathan Y, et al. Among authors: farahani k. IEEE Trans Med Imaging. 2021 Dec;40(12):3748-3761. doi: 10.1109/TMI.2021.3097665. Epub 2021 Nov 30. IEEE Trans Med Imaging. 2021. PMID: 34264825 Free PMC article.
LUNGx Challenge for computerized lung nodule classification.
Armato SG 3rd, Drukker K, Li F, Hadjiiski L, Tourassi GD, Engelmann RM, Giger ML, Redmond G, Farahani K, Kirby JS, Clarke LP. Armato SG 3rd, et al. Among authors: farahani k. J Med Imaging (Bellingham). 2016 Oct;3(4):044506. doi: 10.1117/1.JMI.3.4.044506. Epub 2016 Dec 19. J Med Imaging (Bellingham). 2016. PMID: 28018939 Free PMC article.
Autosegmentation for thoracic radiation treatment planning: A grand challenge at AAPM 2017.
Yang J, Veeraraghavan H, Armato SG 3rd, Farahani K, Kirby JS, Kalpathy-Kramer J, van Elmpt W, Dekker A, Han X, Feng X, Aljabar P, Oliveira B, van der Heyden B, Zamdborg L, Lam D, Gooding M, Sharp GC. Yang J, et al. Among authors: farahani k. Med Phys. 2018 Oct;45(10):4568-4581. doi: 10.1002/mp.13141. Epub 2018 Sep 19. Med Phys. 2018. PMID: 30144101 Free PMC article.
Methods for Segmentation and Classification of Digital Microscopy Tissue Images.
Vu QD, Graham S, Kurc T, To MNN, Shaban M, Qaiser T, Koohbanani NA, Khurram SA, Kalpathy-Cramer J, Zhao T, Gupta R, Kwak JT, Rajpoot N, Saltz J, Farahani K. Vu QD, et al. Among authors: farahani k. Front Bioeng Biotechnol. 2019 Apr 2;7:53. doi: 10.3389/fbioe.2019.00053. eCollection 2019. Front Bioeng Biotechnol. 2019. PMID: 31001524 Free PMC article.
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