Everett LJ - Search Results

1

Benchmark Dose Modeling Approaches for Volatile Organic Chemicals Using a Novel Air-Liquid Interface In Vitro Exposure System.

Speen AM, Murray JR, Krantz QT, Davies D, Evansky P, Harrill JA, Everett LJ, Bundy JL, Dailey LA, Hill J, Zander W, Carlsten E, Monsees M, Zavala J, Higuchi MA. Speen AM, et al. Among authors: everett lj. Toxicol Sci. 2022 Jun 28;188(1):88-107. doi: 10.1093/toxsci/kfac040. Toxicol Sci. 2022. PMID: 35426944 Free PMC article.

2

Comparison of Approaches for Determining Bioactivity Hits from High-Dimensional Profiling Data.

Nyffeler J, Haggard DE, Willis C, Setzer RW, Judson R, Paul-Friedman K, Everett LJ, Harrill JA. Nyffeler J, et al. Among authors: everett lj. SLAS Discov. 2021 Feb;26(2):292-308. doi: 10.1177/2472555220950245. Epub 2020 Aug 29. SLAS Discov. 2021. PMID: 32862757 Free PMC article.

3

High-Throughput Transcriptomics Platform for Screening Environmental Chemicals.

Harrill JA, Everett LJ, Haggard DE, Sheffield T, Bundy JL, Willis CM, Thomas RS, Shah I, Judson RS. Harrill JA, et al. Among authors: everett lj. Toxicol Sci. 2021 Apr 27;181(1):68-89. doi: 10.1093/toxsci/kfab009. Toxicol Sci. 2021. PMID: 33538836 Free PMC article.

4

Predicting molecular initiating events using chemical target annotations and gene expression.

Bundy JL, Judson R, Williams AJ, Grulke C, Shah I, Everett LJ. Bundy JL, et al. Among authors: everett lj. BioData Min. 2022 Mar 4;15(1):7. doi: 10.1186/s13040-022-00292-z. BioData Min. 2022. PMID: 35246223 Free PMC article.

5

Combining phenotypic profiling and targeted RNA-Seq reveals linkages between transcriptional perturbations and chemical effects on cell morphology: Retinoic acid as an example.

Nyffeler J, Willis C, Harris FR, Taylor LW, Judson R, Everett LJ, Harrill JA. Nyffeler J, et al. Among authors: everett lj. Toxicol Appl Pharmacol. 2022 Jun 1;444:116032. doi: 10.1016/j.taap.2022.116032. Epub 2022 Apr 26. Toxicol Appl Pharmacol. 2022. PMID: 35483669 Free PMC article.

6

High-Throughput Transcriptomics of Water Extracts Detects Reductions in Biological Activity with Water Treatment Processes.

Rogers JD, Leusch FDL, Chambers B, Daniels KD, Everett LJ, Judson R, Maruya K, Mehinto AC, Neale PA, Paul-Friedman K, Thomas R, Snyder SA, Harrill J. Rogers JD, et al. Among authors: everett lj. Environ Sci Technol. 2024 Jan 30;58(4):2027-2037. doi: 10.1021/acs.est.3c07525. Epub 2024 Jan 18. Environ Sci Technol. 2024. PMID: 38235672

7

Latent Variables Capture Pathway-Level Points of Departure in High-Throughput Toxicogenomic Data.

Basili D, Reynolds J, Houghton J, Malcomber S, Chambers B, Liddell M, Muller I, White A, Shah I, Everett LJ, Middleton A, Bender A. Basili D, et al. Among authors: everett lj. Chem Res Toxicol. 2022 Apr 18;35(4):670-683. doi: 10.1021/acs.chemrestox.1c00444. Epub 2022 Mar 25. Chem Res Toxicol. 2022. PMID: 35333521 Free PMC article.

8

Development of a Zebrafish S1500+ Sentinel Gene Set for High-Throughput Transcriptomics.

Balik-Meisner MR, Mav D, Phadke DP, Everett LJ, Shah RR, Tal T, Shepard PJ, Merrick BA, Paules RS. Balik-Meisner MR, et al. Among authors: everett lj. Zebrafish. 2019 Aug;16(4):331-347. doi: 10.1089/zeb.2018.1720. Epub 2019 Jun 12. Zebrafish. 2019. PMID: 31188086 Free PMC article.

9

Impact of Aligner, Normalization Method, and Sequencing Depth on TempO-seq Accuracy.

Everett LJ, Mav D, Phadke DP, Balik-Meisner MR, Shah RR. Everett LJ, et al. Bioinform Biol Insights. 2022 Apr 30;16:11779322221095216. doi: 10.1177/11779322221095216. eCollection 2022. Bioinform Biol Insights. 2022. PMID: 35515009 Free PMC article.

10

Gene expression networks in the Drosophila Genetic Reference Panel.

Everett LJ, Huang W, Zhou S, Carbone MA, Lyman RF, Arya GH, Geisz MS, Ma J, Morgante F, St Armour G, Turlapati L, Anholt RRH, Mackay TFC. Everett LJ, et al. Genome Res. 2020 Mar;30(3):485-496. doi: 10.1101/gr.257592.119. Epub 2020 Mar 6. Genome Res. 2020. PMID: 32144088 Free PMC article.

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