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Deep learning-enabled multi-organ segmentation in whole-body mouse scans.
Schoppe O, Pan C, Coronel J, Mai H, Rong Z, Todorov MI, Müskes A, Navarro F, Li H, Ertürk A, Menze BH. Schoppe O, et al. Among authors: erturk a. Nat Commun. 2020 Nov 6;11(1):5626. doi: 10.1038/s41467-020-19449-7. Nat Commun. 2020. PMID: 33159057 Free PMC article.
Shrinkage-mediated imaging of entire organs and organisms using uDISCO.
Pan C, Cai R, Quacquarelli FP, Ghasemigharagoz A, Lourbopoulos A, Matryba P, Plesnila N, Dichgans M, Hellal F, Ertürk A. Pan C, et al. Among authors: erturk a. Nat Methods. 2016 Oct;13(10):859-67. doi: 10.1038/nmeth.3964. Epub 2016 Aug 22. Nat Methods. 2016. PMID: 27548807
Panoptic imaging of transparent mice reveals whole-body neuronal projections and skull-meninges connections.
Cai R, Pan C, Ghasemigharagoz A, Todorov MI, Förstera B, Zhao S, Bhatia HS, Parra-Damas A, Mrowka L, Theodorou D, Rempfler M, Xavier ALR, Kress BT, Benakis C, Steinke H, Liebscher S, Bechmann I, Liesz A, Menze B, Kerschensteiner M, Nedergaard M, Ertürk A. Cai R, et al. Among authors: erturk a. Nat Neurosci. 2019 Feb;22(2):317-327. doi: 10.1038/s41593-018-0301-3. Epub 2018 Dec 31. Nat Neurosci. 2019. PMID: 30598527 Free PMC article.
Deep Learning Reveals Cancer Metastasis and Therapeutic Antibody Targeting in the Entire Body.
Pan C, Schoppe O, Parra-Damas A, Cai R, Todorov MI, Gondi G, von Neubeck B, Böğürcü-Seidel N, Seidel S, Sleiman K, Veltkamp C, Förstera B, Mai H, Rong Z, Trompak O, Ghasemigharagoz A, Reimer MA, Cuesta AM, Coronel J, Jeremias I, Saur D, Acker-Palmer A, Acker T, Garvalov BK, Menze B, Zeidler R, Ertürk A. Pan C, et al. Among authors: erturk a. Cell. 2019 Dec 12;179(7):1661-1676.e19. doi: 10.1016/j.cell.2019.11.013. Cell. 2019. PMID: 31835038 Free PMC article.
Cellular and Molecular Probing of Intact Human Organs.
Zhao S, Todorov MI, Cai R, -Maskari RA, Steinke H, Kemter E, Mai H, Rong Z, Warmer M, Stanic K, Schoppe O, Paetzold JC, Gesierich B, Wong MN, Huber TB, Duering M, Bruns OT, Menze B, Lipfert J, Puelles VG, Wolf E, Bechmann I, Ertürk A. Zhao S, et al. Among authors: erturk a. Cell. 2020 Feb 20;180(4):796-812.e19. doi: 10.1016/j.cell.2020.01.030. Epub 2020 Feb 13. Cell. 2020. PMID: 32059778 Free PMC article.
Machine learning analysis of whole mouse brain vasculature.
Todorov MI, Paetzold JC, Schoppe O, Tetteh G, Shit S, Efremov V, Todorov-Völgyi K, Düring M, Dichgans M, Piraud M, Menze B, Ertürk A. Todorov MI, et al. Among authors: erturk a. Nat Methods. 2020 Apr;17(4):442-449. doi: 10.1038/s41592-020-0792-1. Epub 2020 Mar 11. Nat Methods. 2020. PMID: 32161395 Free PMC article.
A guidebook for DISCO tissue clearing.
Molbay M, Kolabas ZI, Todorov MI, Ohn TL, Ertürk A. Molbay M, et al. Among authors: erturk a. Mol Syst Biol. 2021 Mar;17(3):e9807. doi: 10.15252/msb.20209807. Mol Syst Biol. 2021. PMID: 33769689 Free PMC article. Review.
TISSUE CLEARING.
Richardson DS, Guan W, Matsumoto K, Pan C, Chung K, Ertürk A, Ueda HR, Lichtman JW. Richardson DS, et al. Among authors: erturk a. Nat Rev Methods Primers. 2021;1(1):84. doi: 10.1038/s43586-021-00080-9. Epub 2021 Dec 16. Nat Rev Methods Primers. 2021. PMID: 35128463 Free PMC article.
232 results