Ermolenko DN - Search Results

1

mRNAs and lncRNAs intrinsically form secondary structures with short end-to-end distances.

Lai WC, Kayedkhordeh M, Cornell EV, Farah E, Bellaousov S, Rietmeijer R, Salsi E, Mathews DH, Ermolenko DN. Lai WC, et al. Among authors: ermolenko dn. Nat Commun. 2018 Oct 18;9(1):4328. doi: 10.1038/s41467-018-06792-z. Nat Commun. 2018. PMID: 30337527 Free PMC article.

2

mRNA translocation occurs during the second step of ribosomal intersubunit rotation.

Ermolenko DN, Noller HF. Ermolenko DN, et al. Nat Struct Mol Biol. 2011 Apr;18(4):457-62. doi: 10.1038/nsmb.2011. Epub 2011 Mar 13. Nat Struct Mol Biol. 2011. PMID: 21399643 Free PMC article.

3

Following movement of domain IV of elongation factor G during ribosomal translocation.

Salsi E, Farah E, Dann J, Ermolenko DN. Salsi E, et al. Among authors: ermolenko dn. Proc Natl Acad Sci U S A. 2014 Oct 21;111(42):15060-5. doi: 10.1073/pnas.1410873111. Epub 2014 Oct 6. Proc Natl Acad Sci U S A. 2014. PMID: 25288752 Free PMC article.

4

Movement of elongation factor G between compact and extended conformations.

Salsi E, Farah E, Netter Z, Dann J, Ermolenko DN. Salsi E, et al. Among authors: ermolenko dn. J Mol Biol. 2015 Jan 30;427(2):454-67. doi: 10.1016/j.jmb.2014.11.010. Epub 2014 Nov 15. J Mol Biol. 2015. PMID: 25463439 Free PMC article.

5

An extended U2AF(65)-RNA-binding domain recognizes the 3' splice site signal.

Agrawal AA, Salsi E, Chatrikhi R, Henderson S, Jenkins JL, Green MR, Ermolenko DN, Kielkopf CL. Agrawal AA, et al. Among authors: ermolenko dn. Nat Commun. 2016 Mar 8;7:10950. doi: 10.1038/ncomms10950. Nat Commun. 2016. PMID: 26952537 Free PMC article.

6

EF-G Activation by Phosphate Analogs.

Salsi E, Farah E, Ermolenko DN. Salsi E, et al. Among authors: ermolenko dn. J Mol Biol. 2016 May 22;428(10 Pt B):2248-58. doi: 10.1016/j.jmb.2016.03.032. Epub 2016 Apr 8. J Mol Biol. 2016. PMID: 27063503 Free PMC article.

7

Ensemble and single-molecule FRET studies of protein synthesis.

Lai WC, Ermolenko DN. Lai WC, et al. Among authors: ermolenko dn. Methods. 2018 Mar 15;137:37-48. doi: 10.1016/j.ymeth.2017.12.007. Epub 2017 Dec 13. Methods. 2018. PMID: 29247758 Free PMC article.

8

Observation of preQ₁-II riboswitch dynamics using single-molecule FRET.

Warnasooriya C, Ling C, Belashov IA, Salim M, Wedekind JE, Ermolenko DN. Warnasooriya C, et al. Among authors: ermolenko dn. RNA Biol. 2019 Sep;16(9):1086-1092. doi: 10.1080/15476286.2018.1536591. Epub 2018 Oct 30. RNA Biol. 2019. PMID: 30328747 Free PMC article.

9

A splice site-sensing conformational switch in U2AF2 is modulated by U2AF1 and its recurrent myelodysplasia-associated mutation.

Warnasooriya C, Feeney CF, Laird KM, Ermolenko DN, Kielkopf CL. Warnasooriya C, et al. Among authors: ermolenko dn. Nucleic Acids Res. 2020 Jun 4;48(10):5695-5709. doi: 10.1093/nar/gkaa293. Nucleic Acids Res. 2020. PMID: 32343311 Free PMC article.

10

Making ends meet: New functions of mRNA secondary structure.

Ermolenko DN, Mathews DH. Ermolenko DN, et al. Wiley Interdiscip Rev RNA. 2021 Mar;12(2):e1611. doi: 10.1002/wrna.1611. Epub 2020 Jun 29. Wiley Interdiscip Rev RNA. 2021. PMID: 32597020 Free PMC article. Review.

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