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A georeferenced rRNA amplicon database of aquatic microbiomes from South America.
Metz S, Huber P, Mateus-Barros E, Junger PC, de Melo M, Bagatini IL, Izaguirre I, Câmara Dos Reis M, Llames ME, Accattatis V, Quiroga MV, Devercelli M, Schiaffino MR, Niño-García JP, Bastidas Navarro M, Modenutti B, Vieira H, Saraceno M, Sabio Y García CA, Pereira E, González-Revello A, Piccini C, Unrein F, Alonso C, Sarmento H. Metz S, et al. Among authors: pereira e. Sci Data. 2022 Sep 13;9(1):565. doi: 10.1038/s41597-022-01665-z. Sci Data. 2022. PMID: 36100598 Free PMC article.
Emergence and Spread of a B.1.1.28-Derived P.6 Lineage with Q675H and Q677H Spike Mutations in Uruguay.
Rego N, Salazar C, Paz M, Costábile A, Fajardo A, Ferrés I, Perbolianachis P, Fernández-Calero T, Noya V, Machado MR, Brandes M, Arce R, Arleo M, Possi T, Reyes N, Bentancor MN, Lizasoain A, Bortagaray V, Moller A, Chappos O, Nin N, Hurtado J, Duquía M, González MB, Griffero L, Méndez M, Techera MP, Zanetti J, Pereira E, Rivera B, Maidana M, Alonso M, Smircich P, Arantes I, Mir D, Alonso C, Medina J, Albornoz H, Colina R, Bello G, Moreno P, Moratorio G, Iraola G, Spangenberg L. Rego N, et al. Among authors: pereira e. Viruses. 2021 Sep 10;13(9):1801. doi: 10.3390/v13091801. Viruses. 2021. PMID: 34578382 Free PMC article.
Overview of the interactive task in BioCreative V.
Wang Q, S Abdul S, Almeida L, Ananiadou S, Balderas-Martínez YI, Batista-Navarro R, Campos D, Chilton L, Chou HJ, Contreras G, Cooper L, Dai HJ, Ferrell B, Fluck J, Gama-Castro S, George N, Gkoutos G, Irin AK, Jensen LJ, Jimenez S, Jue TR, Keseler I, Madan S, Matos S, McQuilton P, Milacic M, Mort M, Natarajan J, Pafilis E, Pereira E, Rao S, Rinaldi F, Rothfels K, Salgado D, Silva RM, Singh O, Stefancsik R, Su CH, Subramani S, Tadepally HD, Tsaprouni L, Vasilevsky N, Wang X, Chatr-Aryamontri A, Laulederkind SJ, Matis-Mitchell S, McEntyre J, Orchard S, Pundir S, Rodriguez-Esteban R, Van Auken K, Lu Z, Schaeffer M, Wu CH, Hirschman L, Arighi CN. Wang Q, et al. Among authors: pereira e. Database (Oxford). 2016 Sep 1;2016:baw119. doi: 10.1093/database/baw119. Print 2016. Database (Oxford). 2016. PMID: 27589961 Free PMC article.
Value, but high costs in post-deposition data curation.
ten Hoopen P, Amid C, Buttigieg PL, Pafilis E, Bravakos P, Cerdeño-Tárraga AM, Gibson R, Kahlke T, Legaki A, Narayana Murthy K, Papastefanou G, Pereira E, Rossello M, Luisa Toribio A, Cochrane G. ten Hoopen P, et al. Among authors: pereira e. Database (Oxford). 2016 Feb 9;2016:bav126. doi: 10.1093/database/bav126. Print 2016. Database (Oxford). 2016. PMID: 26861660 Free PMC article.
Oxygen and guanine-cytosine profiles in marine environments.
Romero H, Pereira E, Naya H, Musto H. Romero H, et al. Among authors: pereira e. J Mol Evol. 2009 Aug;69(2):203-6. doi: 10.1007/s00239-009-9230-9. Epub 2009 Jun 25. J Mol Evol. 2009. PMID: 19554248 Free PMC article.