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Single-cell chromatin accessibility profiling of glioblastoma identifies an invasive cancer stem cell population associated with lower survival.
Elife. 2021 Jan 11;10:e64090. doi: 10.7554/eLife.64090.
Elife. 2021.
PMID: 33427645
Free PMC article.
Intratumoral Genetic and Functional Heterogeneity in Pediatric Glioblastoma.
Hoffman M, Gillmor AH, Kunz DJ, Johnston MJ, Nikolic A, Narta K, Zarrei M, King J, Ellestad K, Dang NH, Cavalli FMG, Kushida MM, Coutinho FJ, Zhu Y, Luu B, Ma Y, Mungall AJ, Moore R, Marra MA, Taylor MD, Pugh TJ, Dirks PB, Strother D, Lafay-Cousin L, Resnick AC, Scherer S, Senger DL, Simons BD, Chan JA, Morrissy AS, Gallo M.
Hoffman M, et al.
Cancer Res. 2019 May 1;79(9):2111-2123. doi: 10.1158/0008-5472.CAN-18-3441. Epub 2019 Mar 15.
Cancer Res. 2019.
PMID: 30877103
Free PMC article.
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High-resolution structural genomics reveals new therapeutic vulnerabilities in glioblastoma.
Johnston MJ, Nikolic A, Ninkovic N, Guilhamon P, Cavalli FMG, Seaman S, Zemp FJ, Lee J, Abdelkareem A, Ellestad K, Murison A, Kushida MM, Coutinho FJ, Ma Y, Mungall AJ, Moore R, Marra MA, Taylor MD, Dirks PB, Pugh TJ, Morrissy S, St Croix B, Mahoney DJ, Lupien M, Gallo M.
Johnston MJ, et al.
Genome Res. 2019 Aug;29(8):1211-1222. doi: 10.1101/gr.246520.118. Epub 2019 Jun 27.
Genome Res. 2019.
PMID: 31249064
Free PMC article.
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Copy-scAT: Deconvoluting single-cell chromatin accessibility of genetic subclones in cancer.
Nikolic A, Singhal D, Ellestad K, Johnston M, Shen Y, Gillmor A, Morrissy S, Cairncross JG, Jones S, Lupien M, Chan JA, Neri P, Bahlis N, Gallo M.
Nikolic A, et al.
Sci Adv. 2021 Oct 15;7(42):eabg6045. doi: 10.1126/sciadv.abg6045. Epub 2021 Oct 13.
Sci Adv. 2021.
PMID: 34644115
Free PMC article.
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macroH2A2 antagonizes epigenetic programs of stemness in glioblastoma.
Nikolic A, Maule F, Bobyn A, Ellestad K, Paik S, Marhon SA, Mehdipour P, Lun X, Chen HM, Mallard C, Hay AJ, Johnston MJ, Gafuik CJ, Zemp FJ, Shen Y, Ninkovic N, Osz K, Labit E, Berger ND, Brownsey DK, Kelly JJ, Biernaskie J, Dirks PB, Derksen DJ, Jones SJM, Senger DL, Chan JA, Mahoney DJ, De Carvalho DD, Gallo M.
Nikolic A, et al.
Nat Commun. 2023 May 27;14(1):3062. doi: 10.1038/s41467-023-38919-2.
Nat Commun. 2023.
PMID: 37244935
Free PMC article.
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