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Precursor Intensity-Based Label-Free Quantification Software Tools for Proteomic and Multi-Omic Analysis within the Galaxy Platform.
Proteomes. 2020 Jul 8;8(3):15. doi: 10.3390/proteomes8030015.
Proteomes. 2020.
PMID: 32650610
Free PMC article.
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update.
Galaxy Community.
Galaxy Community.
Nucleic Acids Res. 2022 Jul 5;50(W1):W345-W351. doi: 10.1093/nar/gkac247.
Nucleic Acids Res. 2022.
PMID: 35446428
Free PMC article.
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Expanding the Galaxy's reference data.
VijayKrishna N, Joshi J, Coraor N, Hillman-Jackson J, Bouvier D, van den Beek M, Eguinoa I, Coppens F, Davis J, Stolarczyk M, Sheffield NC, Gladman S, Cuccuru G, Grüning B, Soranzo N, Rasche H, Langhorst BW, Bernt M, Fornika D, de Lima Morais DA, Barrette M, van Heusden P, Petrillo M, Puertas-Gallardo A, Patak A, Hotz HR, Blankenberg D.
VijayKrishna N, et al. Among authors: eguinoa i.
Bioinform Adv. 2022 Apr 29;2(1):vbac030. doi: 10.1093/bioadv/vbac030. eCollection 2022.
Bioinform Adv. 2022.
PMID: 35669346
Free PMC article.
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No more business as usual: Agile and effective responses to emerging pathogen threats require open data and open analytics.
Baker D, van den Beek M, Blankenberg D, Bouvier D, Chilton J, Coraor N, Coppens F, Eguinoa I, Gladman S, Grüning B, Keener N, Larivière D, Lonie A, Kosakovsky Pond S, Maier W, Nekrutenko A, Taylor J, Weaver S.
Baker D, et al. Among authors: eguinoa i.
PLoS Pathog. 2020 Aug 13;16(8):e1008643. doi: 10.1371/journal.ppat.1008643. eCollection 2020 Aug.
PLoS Pathog. 2020.
PMID: 32790776
Free PMC article.
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A SARS-CoV-2 sequence submission tool for the European Nucleotide Archive.
Roncoroni M, Droesbeke B, Eguinoa I, De Ruyck K, D'Anna F, Yusuf D, Grüning B, Backofen R, Coppens F.
Roncoroni M, et al. Among authors: eguinoa i.
Bioinformatics. 2021 Nov 5;37(21):3983-3985. doi: 10.1093/bioinformatics/btab421.
Bioinformatics. 2021.
PMID: 34096994
Free PMC article.
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Ten simple rules for making a software tool workflow-ready.
Brack P, Crowther P, Soiland-Reyes S, Owen S, Lowe D, Williams AR, Groom Q, Dillen M, Coppens F, Grüning B, Eguinoa I, Ewels P, Goble C.
Brack P, et al. Among authors: eguinoa i.
PLoS Comput Biol. 2022 Mar 24;18(3):e1009823. doi: 10.1371/journal.pcbi.1009823. eCollection 2022 Mar.
PLoS Comput Biol. 2022.
PMID: 35324885
Free PMC article.
No abstract available.
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The Arabidopsis condensin CAP-D subunits arrange interphase chromatin.
Municio C, Antosz W, Grasser KD, Kornobis E, Van Bel M, Eguinoa I, Coppens F, Bräutigam A, Lermontova I, Bruckmann A, Zelkowska K, Houben A, Schubert V.
Municio C, et al. Among authors: eguinoa i.
New Phytol. 2021 May;230(3):972-987. doi: 10.1111/nph.17221. Epub 2021 Feb 25.
New Phytol. 2021.
PMID: 33475158
Free article.
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