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Genetic variation among 481 diverse soybean accessions, inferred from genomic re-sequencing.
Valliyodan B, Brown AV, Wang J, Patil G, Liu Y, Otyama PI, Nelson RT, Vuong T, Song Q, Musket TA, Wagner R, Marri P, Reddy S, Sessions A, Wu X, Grant D, Bayer PE, Roorkiwal M, Varshney RK, Liu X, Edwards D, Xu D, Joshi T, Cannon SB, Nguyen HT. Valliyodan B, et al. Among authors: edwards d. Sci Data. 2021 Feb 8;8(1):50. doi: 10.1038/s41597-021-00834-w. Sci Data. 2021. PMID: 33558550 Free PMC article.
Coverage-based consensus calling (CbCC) of short sequence reads and comparison of CbCC results to identify SNPs in chickpea (Cicer arietinum; Fabaceae), a crop species without a reference genome.
Azam S, Thakur V, Ruperao P, Shah T, Balaji J, Amindala B, Farmer AD, Studholme DJ, May GD, Edwards D, Jones JD, Varshney RK. Azam S, et al. Among authors: edwards d. Am J Bot. 2012 Feb;99(2):186-92. doi: 10.3732/ajb.1100419. Epub 2012 Feb 1. Am J Bot. 2012. PMID: 22301893 Free article.
Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement.
Varshney RK, Song C, Saxena RK, Azam S, Yu S, Sharpe AG, Cannon S, Baek J, Rosen BD, Tar'an B, Millan T, Zhang X, Ramsay LD, Iwata A, Wang Y, Nelson W, Farmer AD, Gaur PM, Soderlund C, Penmetsa RV, Xu C, Bharti AK, He W, Winter P, Zhao S, Hane JK, Carrasquilla-Garcia N, Condie JA, Upadhyaya HD, Luo MC, Thudi M, Gowda CL, Singh NP, Lichtenzveig J, Gali KK, Rubio J, Nadarajan N, Dolezel J, Bansal KC, Xu X, Edwards D, Zhang G, Kahl G, Gil J, Singh KB, Datta SK, Jackson SA, Wang J, Cook DR. Varshney RK, et al. Among authors: edwards d. Nat Biotechnol. 2013 Mar;31(3):240-6. doi: 10.1038/nbt.2491. Epub 2013 Jan 27. Nat Biotechnol. 2013. PMID: 23354103 Free article.
A chromosomal genomics approach to assess and validate the desi and kabuli draft chickpea genome assemblies.
Ruperao P, Chan CK, Azam S, Karafiátová M, Hayashi S, Cížková J, Saxena RK, Simková H, Song C, Vrána J, Chitikineni A, Visendi P, Gaur PM, Millán T, Singh KB, Taran B, Wang J, Batley J, Doležel J, Varshney RK, Edwards D. Ruperao P, et al. Among authors: edwards d. Plant Biotechnol J. 2014 Aug;12(6):778-86. doi: 10.1111/pbi.12182. Epub 2014 Apr 5. Plant Biotechnol J. 2014. PMID: 24702794 Free article.
Structural variations in plant genomes.
Saxena RK, Edwards D, Varshney RK. Saxena RK, et al. Among authors: edwards d. Brief Funct Genomics. 2014 Jul;13(4):296-307. doi: 10.1093/bfgp/elu016. Epub 2014 Jun 6. Brief Funct Genomics. 2014. PMID: 24907366 Free PMC article.
Skim-based genotyping by sequencing.
Golicz AA, Bayer PE, Edwards D. Golicz AA, et al. Among authors: edwards d. Methods Mol Biol. 2015;1245:257-70. doi: 10.1007/978-1-4939-1966-6_19. Methods Mol Biol. 2015. PMID: 25373763
High-resolution skim genotyping by sequencing reveals the distribution of crossovers and gene conversions in Cicer arietinum and Brassica napus.
Bayer PE, Ruperao P, Mason AS, Stiller J, Chan CK, Hayashi S, Long Y, Meng J, Sutton T, Visendi P, Varshney RK, Batley J, Edwards D. Bayer PE, et al. Among authors: edwards d. Theor Appl Genet. 2015 Jun;128(6):1039-47. doi: 10.1007/s00122-015-2488-y. Epub 2015 Mar 10. Theor Appl Genet. 2015. PMID: 25754422 Free article.
Application of genomics-assisted breeding for generation of climate resilient crops: progress and prospects.
Kole C, Muthamilarasan M, Henry R, Edwards D, Sharma R, Abberton M, Batley J, Bentley A, Blakeney M, Bryant J, Cai H, Cakir M, Cseke LJ, Cockram J, de Oliveira AC, De Pace C, Dempewolf H, Ellison S, Gepts P, Greenland A, Hall A, Hori K, Hughes S, Humphreys MW, Iorizzo M, Ismail AM, Marshall A, Mayes S, Nguyen HT, Ogbonnaya FC, Ortiz R, Paterson AH, Simon PW, Tohme J, Tuberosa R, Valliyodan B, Varshney RK, Wullschleger SD, Yano M, Prasad M. Kole C, et al. Among authors: edwards d. Front Plant Sci. 2015 Aug 11;6:563. doi: 10.3389/fpls.2015.00563. eCollection 2015. Front Plant Sci. 2015. PMID: 26322050 Free PMC article. Review.
3,801 results