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Genome-wide bidirectional CRISPR screens identify mucins as host factors modulating SARS-CoV-2 infection.
Nat Genet. 2022 Aug;54(8):1078-1089. doi: 10.1038/s41588-022-01131-x. Epub 2022 Jul 25.
Nat Genet. 2022.
PMID: 35879412
Free PMC article.
ecDNA hubs drive cooperative intermolecular oncogene expression.
Hung KL, Yost KE, Xie L, Shi Q, Helmsauer K, Luebeck J, Schöpflin R, Lange JT, Chamorro González R, Weiser NE, Chen C, Valieva ME, Wong IT, Wu S, Dehkordi SR, Duffy CV, Kraft K, Tang J, Belk JA, Rose JC, Corces MR, Granja JM, Li R, Rajkumar U, Friedlein J, Bagchi A, Satpathy AT, Tjian R, Mundlos S, Bafna V, Henssen AG, Mischel PS, Liu Z, Chang HY.
Hung KL, et al. Among authors: duffy cv.
Nature. 2021 Dec;600(7890):731-736. doi: 10.1038/s41586-021-04116-8. Epub 2021 Nov 24.
Nature. 2021.
PMID: 34819668
Free PMC article.
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Genome-wide CRISPR screens of T cell exhaustion identify chromatin remodeling factors that limit T cell persistence.
Belk JA, Yao W, Ly N, Freitas KA, Chen YT, Shi Q, Valencia AM, Shifrut E, Kale N, Yost KE, Duffy CV, Daniel B, Hwee MA, Miao Z, Ashworth A, Mackall CL, Marson A, Carnevale J, Vardhana SA, Satpathy AT.
Belk JA, et al. Among authors: duffy cv.
Cancer Cell. 2022 Jul 11;40(7):768-786.e7. doi: 10.1016/j.ccell.2022.06.001. Epub 2022 Jun 23.
Cancer Cell. 2022.
PMID: 35750052
Free PMC article.
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Deep learning and CRISPR-Cas13d ortholog discovery for optimized RNA targeting.
Wei J, Lotfy P, Faizi K, Baungaard S, Gibson E, Wang E, Slabodkin H, Kinnaman E, Chandrasekaran S, Kitano H, Durrant MG, Duffy CV, Pawluk A, Hsu PD, Konermann S.
Wei J, et al. Among authors: duffy cv.
Cell Syst. 2023 Dec 20;14(12):1087-1102.e13. doi: 10.1016/j.cels.2023.11.006. Epub 2023 Dec 12.
Cell Syst. 2023.
PMID: 38091991
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An organism-wide atlas of hormonal signaling based on the mouse lemur single-cell transcriptome.
Liu S, Ezran C, Wang MFZ, Li Z, Awayan K; Tabula Microcebus Consortium; Long JZ, De Vlaminck I, Wang S, Epelbaum J, Kuo CS, Terrien J, Krasnow MA, Ferrell JE Jr.
Liu S, et al.
Nat Commun. 2024 Mar 11;15(1):2188. doi: 10.1038/s41467-024-46070-9.
Nat Commun. 2024.
PMID: 38467625
Free PMC article.
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Adversarial domain translation networks for integrating large-scale atlas-level single-cell datasets.
Zhao J, Wang G, Ming J, Lin Z, Wang Y; Tabula Microcebus Consortium; Wu AR, Yang C.
Zhao J, et al.
Nat Comput Sci. 2022 May;2(5):317-330. doi: 10.1038/s43588-022-00251-y. Epub 2022 May 30.
Nat Comput Sci. 2022.
PMID: 38177826
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Covalently-crosslinked mucin biopolymer hydrogels for sustained drug delivery.
Duffy CV, David L, Crouzier T.
Duffy CV, et al.
Acta Biomater. 2015 Jul;20:51-59. doi: 10.1016/j.actbio.2015.03.024. Epub 2015 Mar 25.
Acta Biomater. 2015.
PMID: 25818947
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