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NGS++: a library for rapid prototyping of epigenomics software tools.
Nordell Markovits A, Joly Beauparlant C, Toupin D, Wang S, Droit A, Gevry N. Nordell Markovits A, et al. Among authors: droit a. Bioinformatics. 2013 Aug 1;29(15):1893-4. doi: 10.1093/bioinformatics/btt312. Epub 2013 Jun 4. Bioinformatics. 2013. PMID: 23736531
This library allows easy integration of new formats and rapid prototyping of new functionalities with a focus on the analysis of genomic regions and features. It offers a powerful, yet versatile and easily extensible interface to read, write and manipulate multiple …
This library allows easy integration of new formats and rapid prototyping of new functionalities with a focus on the analysis of geno …
rTANDEM, an R/Bioconductor package for MS/MS protein identification.
Fournier F, Joly Beauparlant C, Paradis R, Droit A. Fournier F, et al. Among authors: droit a. Bioinformatics. 2014 Aug 1;30(15):2233-4. doi: 10.1093/bioinformatics/btu178. Epub 2014 Apr 3. Bioinformatics. 2014. PMID: 24700319
Together, those two packages form an entry point for a general MS/MS-based proteomic pipeline in R/Bioconductor. AVAILABILITY AND IMPLEMENTATION: rTANDEM and shinyTANDEM are distributed in R/Bioconductor, http://bioconductor.org/packages/release/bioc/. The packages are und …
Together, those two packages form an entry point for a general MS/MS-based proteomic pipeline in R/Bioconductor. AVAILABILITY AND IMP …
Establishment of a comprehensive reference transcriptome for vertebral bone tissue to study the impacts of nutritional phosphorus deficiency in rainbow trout (Oncorhynchus mykiss, Walbaum).
Le Luyer J, Deschamps MH, Proulx E, Poirier Stewart N, Joly Beauparlant C, Droit A, Robert C, Vandenberg GW. Le Luyer J, et al. Among authors: droit a. Mar Genomics. 2014 Dec;18PB:141-144. doi: 10.1016/j.margen.2014.10.002. Epub 2014 Oct 31. Mar Genomics. 2014. PMID: 25468063
VEXOR: an integrative environment for prioritization of functional variants in fine-mapping analysis.
Lemaçon A, Joly Beauparlant C, Soucy P, Allen J, Easton D, Kraft P, Simard J, Droit A. Lemaçon A, et al. Among authors: droit a. Bioinformatics. 2017 May 1;33(9):1389-1391. doi: 10.1093/bioinformatics/btw826. Bioinformatics. 2017. PMID: 28453673 Free PMC article.
RESULTS: From an awareness of the amount of work needed to analyze a single locus, we have built a flexible, versatile and easy-to-use web interface designed to help in prioritizing variants and predicting their potential functional implications. This interface acts …
RESULTS: From an awareness of the amount of work needed to analyze a single locus, we have built a flexible, versatile and eas …
182 results