Dowell RD - Search Results

1

Enhancer RNA profiling predicts transcription factor activity.

Azofeifa JG, Allen MA, Hendrix JR, Read T, Rubin JD, Dowell RD. Azofeifa JG, et al. Among authors: dowell rd. Genome Res. 2018 Feb 15;28(3):334-44. doi: 10.1101/gr.225755.117. Online ahead of print. Genome Res. 2018. PMID: 29449408 Free PMC article.

2

HIF1A employs CDK8-mediator to stimulate RNAPII elongation in response to hypoxia.

Galbraith MD, Allen MA, Bensard CL, Wang X, Schwinn MK, Qin B, Long HW, Daniels DL, Hahn WC, Dowell RD, Espinosa JM. Galbraith MD, et al. Among authors: dowell rd. Cell. 2013 Jun 6;153(6):1327-39. doi: 10.1016/j.cell.2013.04.048. Cell. 2013. PMID: 23746844 Free PMC article.

3

Retrospective reflections of a whistleblower: opinions on misconduct responses.

Allen M, Dowell R. Allen M, et al. Account Res. 2013;20(5-6):339-48. doi: 10.1080/08989621.2013.822249. Account Res. 2013. PMID: 24028481

4

Global analysis of p53-regulated transcription identifies its direct targets and unexpected regulatory mechanisms.

Allen MA, Andrysik Z, Dengler VL, Mellert HS, Guarnieri A, Freeman JA, Sullivan KD, Galbraith MD, Luo X, Kraus WL, Dowell RD, Espinosa JM. Allen MA, et al. Among authors: dowell rd. Elife. 2014 May 27;3:e02200. doi: 10.7554/eLife.02200. Elife. 2014. PMID: 24867637 Free PMC article.

5

Engineered calcium-precipitable restriction enzyme.

Hendrix J, Read T, Lalonde JF, Jensen PK, Heymann W, Lovelace E, Zimmermann SA, Brasino M, Rokicki J, Dowell RD. Hendrix J, et al. Among authors: dowell rd. ACS Synth Biol. 2014 Dec 19;3(12):969-71. doi: 10.1021/sb500042m. ACS Synth Biol. 2014. PMID: 25524101

6

Prolonged Cre expression driven by the α-myosin heavy chain promoter can be cardiotoxic.

Pugach EK, Richmond PA, Azofeifa JG, Dowell RD, Leinwand LA. Pugach EK, et al. Among authors: dowell rd. J Mol Cell Cardiol. 2015 Sep;86:54-61. doi: 10.1016/j.yjmcc.2015.06.019. Epub 2015 Jul 2. J Mol Cell Cardiol. 2015. PMID: 26141530 Free PMC article.

7

A trans-acting Variant within the Transcription Factor RIM101 Interacts with Genetic Background to Determine its Regulatory Capacity.

Read T, Richmond PA, Dowell RD. Read T, et al. Among authors: dowell rd. PLoS Genet. 2016 Jan 11;12(1):e1005746. doi: 10.1371/journal.pgen.1005746. eCollection 2016 Jan. PLoS Genet. 2016. PMID: 26751950 Free PMC article.

8

An Annotation Agnostic Algorithm for Detecting Nascent RNA Transcripts in GRO-Seq.

Azofeifa JG, Allen MA, Lladser ME, Dowell RD. Azofeifa JG, et al. Among authors: dowell rd. IEEE/ACM Trans Comput Biol Bioinform. 2017 Sep-Oct;14(5):1070-1081. doi: 10.1109/TCBB.2016.2520919. Epub 2016 Jan 26. IEEE/ACM Trans Comput Biol Bioinform. 2017. PMID: 26829802 Free PMC article.

9

RNA Pol II transcription model and interpretation of GRO-seq data.

Lladser ME, Azofeifa JG, Allen MA, Dowell RD. Lladser ME, et al. Among authors: dowell rd. J Math Biol. 2017 Jan;74(1-2):77-97. doi: 10.1007/s00285-016-1014-4. Epub 2016 May 3. J Math Biol. 2017. PMID: 27142882

10

A generative model for the behavior of RNA polymerase.

Azofeifa JG, Dowell RD. Azofeifa JG, et al. Among authors: dowell rd. Bioinformatics. 2017 Jan 15;33(2):227-234. doi: 10.1093/bioinformatics/btw599. Epub 2016 Sep 23. Bioinformatics. 2017. PMID: 27663494 Free PMC article.

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