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MoiRNAiFold: a novel tool for complex in silico RNA design.
Minuesa G, Alsina C, Garcia-Martin JA, Oliveros JC, Dotu I. Minuesa G, et al. Among authors: dotu i. Nucleic Acids Res. 2021 May 21;49(9):4934-4943. doi: 10.1093/nar/gkab331. Nucleic Acids Res. 2021. PMID: 33956139 Free PMC article.
RNAiFold: a web server for RNA inverse folding and molecular design.
Garcia-Martin JA, Clote P, Dotu I. Garcia-Martin JA, et al. Among authors: dotu i. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W465-70. doi: 10.1093/nar/gkt280. Epub 2013 May 21. Nucleic Acids Res. 2013. PMID: 23700314 Free PMC article.
RNAiFold2T: Constraint Programming design of thermo-IRES switches.
Garcia-Martin JA, Dotu I, Fernandez-Chamorro J, Lozano G, Ramajo J, Martinez-Salas E, Clote P. Garcia-Martin JA, et al. Among authors: dotu i. Bioinformatics. 2016 Jun 15;32(12):i360-i368. doi: 10.1093/bioinformatics/btw265. Bioinformatics. 2016. PMID: 27307638 Free PMC article.
Computing folding pathways between RNA secondary structures.
Dotu I, Lorenz WA, Van Hentenryck P, Clote P. Dotu I, et al. Nucleic Acids Res. 2010 Mar;38(5):1711-22. doi: 10.1093/nar/gkp1054. Epub 2009 Dec 30. Nucleic Acids Res. 2010. PMID: 20044352 Free PMC article.
30 results