Donato M - Search Results

1

Detecting qualitative changes in biological systems.

Mitrea C, Bollig-Fischer A, Voichiţa C, Donato M, Romero R, Drăghici S. Mitrea C, et al. Among authors: donato m. Sci Rep. 2020 May 18;10(1):8146. doi: 10.1038/s41598-020-62578-8. Sci Rep. 2020. PMID: 32424123 Free PMC article.

2

Analysis and correction of crosstalk effects in pathway analysis.

Donato M, Xu Z, Tomoiaga A, Granneman JG, Mackenzie RG, Bao R, Than NG, Westfall PH, Romero R, Draghici S. Donato M, et al. Genome Res. 2013 Nov;23(11):1885-93. doi: 10.1101/gr.153551.112. Epub 2013 Aug 9. Genome Res. 2013. PMID: 23934932 Free PMC article.

3

Methods and approaches in the topology-based analysis of biological pathways.

Mitrea C, Taghavi Z, Bokanizad B, Hanoudi S, Tagett R, Donato M, Voichiţa C, Drăghici S. Mitrea C, et al. Among authors: donato m. Front Physiol. 2013 Oct 10;4:278. doi: 10.3389/fphys.2013.00278. Front Physiol. 2013. PMID: 24133454 Free PMC article. Review.

4

A novel bi-level meta-analysis approach: applied to biological pathway analysis.

Nguyen T, Tagett R, Donato M, Mitrea C, Draghici S. Nguyen T, et al. Among authors: donato m. Bioinformatics. 2016 Feb 1;32(3):409-16. doi: 10.1093/bioinformatics/btv588. Epub 2015 Oct 14. Bioinformatics. 2016. PMID: 26471455 Free PMC article.

5

MICRORNA-AUGMENTED PATHWAYS (mirAP) AND THEIR APPLICATIONS TO PATHWAY ANALYSIS AND DISEASE SUBTYPING.

Diaz D, Donato M, Nguyen T, Draghici S. Diaz D, et al. Among authors: donato m. Pac Symp Biocomput. 2017;22:390-401. doi: 10.1142/9789813207813_0037. Pac Symp Biocomput. 2017. PMID: 27896992 Free PMC article.

6

An approach to infer putative disease-specific mechanisms using neighboring gene networks.

Ansari S, Donato M, Saberian N, Draghici S. Ansari S, et al. Among authors: donato m. Bioinformatics. 2017 Jul 1;33(13):1987-1994. doi: 10.1093/bioinformatics/btx097. Bioinformatics. 2017. PMID: 28200075 Free PMC article.

7

Identifying biologically relevant putative mechanisms in a given phenotype comparison.

Hanoudi S, Donato M, Draghici S. Hanoudi S, et al. Among authors: donato m. PLoS One. 2017 May 9;12(5):e0176950. doi: 10.1371/journal.pone.0176950. eCollection 2017. PLoS One. 2017. PMID: 28486531 Free PMC article.

8

A novel computational approach for drug repurposing using systems biology.

Peyvandipour A, Saberian N, Shafi A, Donato M, Draghici S. Peyvandipour A, et al. Among authors: donato m. Bioinformatics. 2018 Aug 15;34(16):2817-2825. doi: 10.1093/bioinformatics/bty133. Bioinformatics. 2018. PMID: 29534151 Free PMC article.

9

A novel pathway analysis approach based on the unexplained disregulation of genes.

Ansari S, Voichita C, Donato M, Tagett R, Draghici S. Ansari S, et al. Among authors: donato m. Proc IEEE Inst Electr Electron Eng. 2017 Mar;105(3):482-495. doi: 10.1109/JPROC.2016.2531000. Epub 2016 Mar 24. Proc IEEE Inst Electr Electron Eng. 2017. PMID: 30337764 Free PMC article.

10

A new computational drug repurposing method using established disease-drug pair knowledge.

Saberian N, Peyvandipour A, Donato M, Ansari S, Draghici S. Saberian N, et al. Among authors: donato m. Bioinformatics. 2019 Oct 1;35(19):3672-3678. doi: 10.1093/bioinformatics/btz156. Bioinformatics. 2019. PMID: 30840053 Free PMC article.

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