Domingues DS - Search Results

1

A Bioinformatics Tool for Efficient Retrieval of High-Confidence Terpene Synthases (TPS) and Application to the Identification of TPS in Coffea and Quillaja.

Domingues DS, Oliveira LS, Lemos SMC, Barros GCC, Ivamoto-Suzuki ST. Domingues DS, et al. Methods Mol Biol. 2022;2469:43-53. doi: 10.1007/978-1-0716-2185-1_4. Methods Mol Biol. 2022. PMID: 35508828

2

Transcriptional patterns of Coffea arabica L. nitrate reductase, glutamine and asparagine synthetase genes are modulated under nitrogen suppression and coffee leaf rust.

Baba VY, Braghini MT, Dos Santos TB, de Carvalho K, Soares JDM, Ivamoto-Suzuki ST, Maluf MP, Padilha L, Paccola-Meirelles LD, Pereira LF, Domingues DS. Baba VY, et al. Among authors: domingues ds. PeerJ. 2020 Jan 3;8:e8320. doi: 10.7717/peerj.8320. eCollection 2020. PeerJ. 2020. PMID: 31915587 Free PMC article.

3

Low-Copy Genes in Terpenoid Metabolism: The Evolution and Expression of MVK and DXR Genes in Angiosperms.

Silva N, Ivamoto-Suzuki ST, Camargo PO, Rosa RS, Pereira LFP, Domingues DS. Silva N, et al. Among authors: domingues ds. Plants (Basel). 2020 Apr 19;9(4):525. doi: 10.3390/plants9040525. Plants (Basel). 2020. PMID: 32325804 Free PMC article.

4

Genome-Wide Screening and Characterization of Non-Coding RNAs in Coffea canephora.

Lemos SMC, Fonçatti LFC, Guyot R, Paschoal AR, Domingues DS. Lemos SMC, et al. Among authors: domingues ds. Noncoding RNA. 2020 Sep 11;6(3):39. doi: 10.3390/ncrna6030039. Noncoding RNA. 2020. PMID: 32932872 Free PMC article.

5

Computational Analysis of Transposable Elements and CircRNAs in Plants.

Oliveira LS, Patera AC, Domingues DS, Sanches DS, Lopes FM, Bugatti PH, Saito PTM, Maracaja-Coutinho V, Durham AM, Paschoal AR. Oliveira LS, et al. Among authors: domingues ds. Methods Mol Biol. 2021;2362:147-172. doi: 10.1007/978-1-0716-1645-1_9. Methods Mol Biol. 2021. PMID: 34195962

6

Transcriptomic alterations in roots of two contrasting Coffea arabica cultivars after hexanoic acid priming.

Budzinski IGF, Camargo PO, Lemos SMC, Guyot R, Calzado NF, Ivamoto-Suzuki ST, Domingues DS. Budzinski IGF, et al. Among authors: domingues ds. Front Genet. 2022 Oct 28;13:925811. doi: 10.3389/fgene.2022.925811. eCollection 2022. Front Genet. 2022. PMID: 36386801 Free PMC article. No abstract available.

7

CoffeebEST: an integrated resource for Coffea spp expressed sequence tags.

Paschoal AR, Fernandes ED, Silva JC, Lopes FM, Pereira LF, Domingues DS. Paschoal AR, et al. Among authors: domingues ds. Genet Mol Res. 2014 Dec 19;13(4):10913-20. doi: 10.4238/2014.December.19.13. Genet Mol Res. 2014. PMID: 25526212 Free article.

8

Genome-wide identification, classification and transcriptional analysis of nitrate and ammonium transporters in Coffea.

Santos TB, Lima JE, Felicio MS, Soares JDM, Domingues DS. Santos TB, et al. Among authors: domingues ds. Genet Mol Biol. 2017;40(1 suppl 1):346-359. doi: 10.1590/1678-4685-GMB-2016-0041. Epub 2017 Apr 10. Genet Mol Biol. 2017. PMID: 28399192 Free PMC article.

9

ceRNAs in plants: computational approaches and associated challenges for target mimic research.

Paschoal AR, Lozada-Chávez I, Domingues DS, Stadler PF. Paschoal AR, et al. Among authors: domingues ds. Brief Bioinform. 2018 Nov 27;19(6):1273-1289. doi: 10.1093/bib/bbx058. Brief Bioinform. 2018. PMID: 28575144 Review.

10

Pattern recognition analysis on long noncoding RNAs: a tool for prediction in plants.

Negri TDC, Alves WAL, Bugatti PH, Saito PTM, Domingues DS, Paschoal AR. Negri TDC, et al. Among authors: domingues ds. Brief Bioinform. 2019 Mar 25;20(2):682-689. doi: 10.1093/bib/bby034. Brief Bioinform. 2019. PMID: 29697740 Review.

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