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Limitations of Transformers on Clinical Text Classification.
Gao S, Alawad M, Young MT, Gounley J, Schaefferkoetter N, Yoon HJ, Wu XC, Durbin EB, Doherty J, Stroup A, Coyle L, Tourassi G. Gao S, et al. Among authors: doherty j. IEEE J Biomed Health Inform. 2021 Sep;25(9):3596-3607. doi: 10.1109/JBHI.2021.3062322. Epub 2021 Sep 3. IEEE J Biomed Health Inform. 2021. PMID: 33635801 Free PMC article.
Deep active learning for classifying cancer pathology reports.
De Angeli K, Gao S, Alawad M, Yoon HJ, Schaefferkoetter N, Wu XC, Durbin EB, Doherty J, Stroup A, Coyle L, Penberthy L, Tourassi G. De Angeli K, et al. Among authors: doherty j. BMC Bioinformatics. 2021 Mar 9;22(1):113. doi: 10.1186/s12859-021-04047-1. BMC Bioinformatics. 2021. PMID: 33750288 Free PMC article.
Class imbalance in out-of-distribution datasets: Improving the robustness of the TextCNN for the classification of rare cancer types.
De Angeli K, Gao S, Danciu I, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz S, Wiggins C, Damesyn M, Coyle L, Penberthy L, Tourassi GD, Yoon HJ. De Angeli K, et al. Among authors: doherty j. J Biomed Inform. 2022 Jan;125:103957. doi: 10.1016/j.jbi.2021.103957. Epub 2021 Nov 22. J Biomed Inform. 2022. PMID: 34823030 Free PMC article.
A Keyword-Enhanced Approach to Handle Class Imbalance in Clinical Text Classification.
Blanchard AE, Gao S, Yoon HJ, Christian JB, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz SM, Wiggins C, Coyle L, Penberthy L, Tourassi GD. Blanchard AE, et al. Among authors: doherty j. IEEE J Biomed Health Inform. 2022 Jun;26(6):2796-2803. doi: 10.1109/JBHI.2022.3141976. Epub 2022 Jun 3. IEEE J Biomed Health Inform. 2022. PMID: 35020599 Free PMC article.
Automatic information extraction from childhood cancer pathology reports.
Yoon HJ, Peluso A, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz S, Wiggins C, Coyle L, Penberthy L. Yoon HJ, et al. Among authors: doherty j. JAMIA Open. 2022 Jun 16;5(2):ooac049. doi: 10.1093/jamiaopen/ooac049. eCollection 2022 Jul. JAMIA Open. 2022. PMID: 35721398 Free PMC article.
Using ensembles and distillation to optimize the deployment of deep learning models for the classification of electronic cancer pathology reports.
De Angeli K, Gao S, Blanchard A, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz SM, Wiggins C, Coyle L, Penberthy L, Tourassi G, Yoon HJ. De Angeli K, et al. Among authors: doherty j. JAMIA Open. 2022 Sep 13;5(3):ooac075. doi: 10.1093/jamiaopen/ooac075. eCollection 2022 Oct. JAMIA Open. 2022. PMID: 36110150 Free PMC article.
Deep learning uncertainty quantification for clinical text classification.
Peluso A, Danciu I, Yoon HJ, Yusof JM, Bhattacharya T, Spannaus A, Schaefferkoetter N, Durbin EB, Wu XC, Stroup A, Doherty J, Schwartz S, Wiggins C, Coyle L, Penberthy L, Tourassi GD, Gao S. Peluso A, et al. Among authors: doherty j. J Biomed Inform. 2024 Jan;149:104576. doi: 10.1016/j.jbi.2023.104576. Epub 2023 Dec 13. J Biomed Inform. 2024. PMID: 38101690 Free article.
1,315 results