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Enzymatic methyl sequencing detects DNA methylation at single-base resolution from picograms of DNA.
Vaisvila R, Ponnaluri VKC, Sun Z, Langhorst BW, Saleh L, Guan S, Dai N, Campbell MA, Sexton BS, Marks K, Samaranayake M, Samuelson JC, Church HE, Tamanaha E, Corrêa IR Jr, Pradhan S, Dimalanta ET, Evans TC Jr, Williams L, Davis TB. Vaisvila R, et al. Among authors: dimalanta et. Genome Res. 2021 Jul;31(7):1280-1289. doi: 10.1101/gr.266551.120. Epub 2021 Jun 17. Genome Res. 2021. PMID: 34140313 Free PMC article.
A method for selectively enriching microbial DNA from contaminating vertebrate host DNA.
Feehery GR, Yigit E, Oyola SO, Langhorst BW, Schmidt VT, Stewart FJ, Dimalanta ET, Amaral-Zettler LA, Davis T, Quail MA, Pradhan S. Feehery GR, et al. Among authors: dimalanta et. PLoS One. 2013 Oct 28;8(10):e76096. doi: 10.1371/journal.pone.0076096. eCollection 2013. PLoS One. 2013. PMID: 24204593 Free PMC article.
PacBio-Based Mitochondrial Genome Assembly of Leucaena trichandra (Leguminosae) and an Intrageneric Assessment of Mitochondrial RNA Editing.
Kovar L, Nageswara-Rao M, Ortega-Rodriguez S, Dugas DV, Straub S, Cronn R, Strickler SR, Hughes CE, Hanley KA, Rodriguez DN, Langhorst BW, Dimalanta ET, Bailey CD. Kovar L, et al. Among authors: dimalanta et. Genome Biol Evol. 2018 Sep 1;10(9):2501-2517. doi: 10.1093/gbe/evy179. Genome Biol Evol. 2018. PMID: 30137422 Free PMC article.
Circulating miRNA Spaceflight Signature Reveals Targets for Countermeasure Development.
Malkani S, Chin CR, Cekanaviciute E, Mortreux M, Okinula H, Tarbier M, Schreurs AS, Shirazi-Fard Y, Tahimic CGT, Rodriguez DN, Sexton BS, Butler D, Verma A, Bezdan D, Durmaz C, MacKay M, Melnick A, Meydan C, Li S, Garrett-Bakelman F, Fromm B, Afshinnekoo E, Langhorst BW, Dimalanta ET, Cheng-Campbell M, Blaber E, Schisler JC, Vanderburg C, Friedländer MR, McDonald JT, Costes SV, Rutkove S, Grabham P, Mason CE, Beheshti A. Malkani S, et al. Among authors: dimalanta et. Cell Rep. 2020 Dec 8;33(10):108448. doi: 10.1016/j.celrep.2020.108448. Epub 2020 Nov 25. Cell Rep. 2020. PMID: 33242410 Free PMC article.
Sequence and structural variation in a human genome uncovered by short-read, massively parallel ligation sequencing using two-base encoding.
McKernan KJ, Peckham HE, Costa GL, McLaughlin SF, Fu Y, Tsung EF, Clouser CR, Duncan C, Ichikawa JK, Lee CC, Zhang Z, Ranade SS, Dimalanta ET, Hyland FC, Sokolsky TD, Zhang L, Sheridan A, Fu H, Hendrickson CL, Li B, Kotler L, Stuart JR, Malek JA, Manning JM, Antipova AA, Perez DS, Moore MP, Hayashibara KC, Lyons MR, Beaudoin RE, Coleman BE, Laptewicz MW, Sannicandro AE, Rhodes MD, Gottimukkala RK, Yang S, Bafna V, Bashir A, MacBride A, Alkan C, Kidd JM, Eichler EE, Reese MG, De La Vega FM, Blanchard AP. McKernan KJ, et al. Among authors: dimalanta et. Genome Res. 2009 Sep;19(9):1527-41. doi: 10.1101/gr.091868.109. Epub 2009 Jun 22. Genome Res. 2009. PMID: 19546169 Free PMC article.
Comprehensive nucleosome mapping of the human genome in cancer progression.
Druliner BR, Vera D, Johnson R, Ruan X, Apone LM, Dimalanta ET, Stewart FJ, Boardman L, Dennis JH. Druliner BR, et al. Among authors: dimalanta et. Oncotarget. 2016 Mar 22;7(12):13429-45. doi: 10.18632/oncotarget.6811. Oncotarget. 2016. PMID: 26735342 Free PMC article.
18 results