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Hunting alters viral transmission and evolution in a large carnivore.
Fountain-Jones NM, Kraberger S, Gagne RB, Gilbertson MLJ, Trumbo DR, Charleston M, Salerno PE, Chris Funk W, Crooks K, Logan K, Alldredge M, Dellicour S, Baele G, Didelot X, VandeWoude S, Carver S, Craft ME. Fountain-Jones NM, et al. Among authors: didelot x. Nat Ecol Evol. 2022 Feb;6(2):174-182. doi: 10.1038/s41559-021-01635-5. Epub 2022 Jan 27. Nat Ecol Evol. 2022. PMID: 35087217 Free PMC article.
Emerging phylogenetic structure of the SARS-CoV-2 pandemic.
Fountain-Jones NM, Appaw RC, Carver S, Didelot X, Volz E, Charleston M. Fountain-Jones NM, et al. Among authors: didelot x. Virus Evol. 2020 Nov 10;6(2):veaa082. doi: 10.1093/ve/veaa082. eCollection 2020 Jul. Virus Evol. 2020. PMID: 33335743 Free PMC article.
Measurably evolving pathogens in the genomic era.
Biek R, Pybus OG, Lloyd-Smith JO, Didelot X. Biek R, et al. Among authors: didelot x. Trends Ecol Evol. 2015 Jun;30(6):306-13. doi: 10.1016/j.tree.2015.03.009. Epub 2015 Apr 14. Trends Ecol Evol. 2015. PMID: 25887947 Free PMC article. Review.
Emergence of methicillin resistance predates the clinical use of antibiotics.
Larsen J, Raisen CL, Ba X, Sadgrove NJ, Padilla-González GF, Simmonds MSJ, Loncaric I, Kerschner H, Apfalter P, Hartl R, Deplano A, Vandendriessche S, Černá Bolfíková B, Hulva P, Arendrup MC, Hare RK, Barnadas C, Stegger M, Sieber RN, Skov RL, Petersen A, Angen Ø, Rasmussen SL, Espinosa-Gongora C, Aarestrup FM, Lindholm LJ, Nykäsenoja SM, Laurent F, Becker K, Walther B, Kehrenberg C, Cuny C, Layer F, Werner G, Witte W, Stamm I, Moroni P, Jørgensen HJ, de Lencastre H, Cercenado E, García-Garrote F, Börjesson S, Hæggman S, Perreten V, Teale CJ, Waller AS, Pichon B, Curran MD, Ellington MJ, Welch JJ, Peacock SJ, Seilly DJ, Morgan FJE, Parkhill J, Hadjirin NF, Lindsay JA, Holden MTG, Edwards GF, Foster G, Paterson GK, Didelot X, Holmes MA, Harrison EM, Larsen AR. Larsen J, et al. Among authors: didelot x. Nature. 2022 Feb;602(7895):135-141. doi: 10.1038/s41586-021-04265-w. Epub 2022 Jan 5. Nature. 2022. PMID: 34987223 Free PMC article.
Phylogenetic Tools for Generalized HIV-1 Epidemics: Findings from the PANGEA-HIV Methods Comparison.
Ratmann O, Hodcroft EB, Pickles M, Cori A, Hall M, Lycett S, Colijn C, Dearlove B, Didelot X, Frost S, Hossain AS, Joy JB, Kendall M, Kühnert D, Leventhal GE, Liang R, Plazzotta G, Poon AF, Rasmussen DA, Stadler T, Volz E, Weis C, Leigh Brown AJ, Fraser C; PANGEA-HIV Consortium. Ratmann O, et al. Among authors: didelot x. Mol Biol Evol. 2017 Jan;34(1):185-203. doi: 10.1093/molbev/msw217. Epub 2016 Oct 7. Mol Biol Evol. 2017. PMID: 28053012 Free PMC article.
179 results