Dias O - Search Results

1

OrtSuite: from genomes to prediction of microbial interactions within targeted ecosystem processes.

Saraiva JP, Bartholomäus A, Kallies R, Gomes M, Bicalho M, Coelho Kasmanas J, Vogt C, Chatzinotas A, Stadler P, Dias O, Nunes da Rocha U. Saraiva JP, et al. Among authors: dias o. Life Sci Alliance. 2021 Sep 27;4(12):e202101167. doi: 10.26508/lsa.202101167. Print 2021 Dec. Life Sci Alliance. 2021. PMID: 34580179 Free PMC article.

2

A randomised control trial protocol of MuST for vascular access cannulation in hemodialysis patients (MuST Study): contributions for a safe nursing intervention.

Peralta R, Wammi A, Stauss-Gabo M, Dias Ó, Carvalho H, Cristóvão A. Peralta R, et al. Among authors: dias o. BMC Nephrol. 2022 Jun 21;23(1):218. doi: 10.1186/s12882-022-02842-3. BMC Nephrol. 2022. PMID: 35729492 Free PMC article.

3

iDS372, a Phenotypically Reconciled Model for the Metabolism of Streptococcus pneumoniae Strain R6.

Dias O, Saraiva J, Faria C, Ramirez M, Pinto F, Rocha I. Dias O, et al. Front Microbiol. 2019 Jun 25;10:1283. doi: 10.3389/fmicb.2019.01283. eCollection 2019. Front Microbiol. 2019. PMID: 31293525 Free PMC article.

4

Predicting promoters in phage genomes using PhagePromoter.

Sampaio M, Rocha M, Oliveira H, Dias O. Sampaio M, et al. Among authors: dias o. Bioinformatics. 2019 Dec 15;35(24):5301-5302. doi: 10.1093/bioinformatics/btz580. Bioinformatics. 2019. PMID: 31359029

5

Reconstructing genome-scale metabolic models with merlin.

Dias O, Rocha M, Ferreira EC, Rocha I. Dias O, et al. Nucleic Acids Res. 2015 Apr 30;43(8):3899-910. doi: 10.1093/nar/gkv294. Epub 2015 Apr 6. Nucleic Acids Res. 2015. PMID: 25845595 Free PMC article.

6

Genome-wide metabolic (re-) annotation of Kluyveromyces lactis.

Dias O, Gombert AK, Ferreira EC, Rocha I. Dias O, et al. BMC Genomics. 2012 Oct 1;13:517. doi: 10.1186/1471-2164-13-517. BMC Genomics. 2012. PMID: 23025710 Free PMC article.

7

Genome-wide metabolic re-annotation of Ashbya gossypii: new insights into its metabolism through a comparative analysis with Saccharomyces cerevisiae and Kluyveromyces lactis.

Gomes D, Aguiar TQ, Dias O, Ferreira EC, Domingues L, Rocha I. Gomes D, et al. Among authors: dias o. BMC Genomics. 2014 Sep 24;15(1):810. doi: 10.1186/1471-2164-15-810. BMC Genomics. 2014. PMID: 25253284 Free PMC article.

8

Reconstructing High-Quality Large-Scale Metabolic Models with merlin.

Dias O, Rocha M, Ferreira EC, Rocha I. Dias O, et al. Methods Mol Biol. 2018;1716:1-36. doi: 10.1007/978-1-4939-7528-0_1. Methods Mol Biol. 2018. PMID: 29222747

9

SamPler - a novel method for selecting parameters for gene functional annotation routines.

Cruz F, Lagoa D, Mendes J, Rocha I, Ferreira EC, Rocha M, Dias O. Cruz F, et al. Among authors: dias o. BMC Bioinformatics. 2019 Sep 5;20(1):454. doi: 10.1186/s12859-019-3038-4. BMC Bioinformatics. 2019. PMID: 31488049 Free PMC article.

10

merlin, an improved framework for the reconstruction of high-quality genome-scale metabolic models.

Capela J, Lagoa D, Rodrigues R, Cunha E, Cruz F, Barbosa A, Bastos J, Lima D, Ferreira EC, Rocha M, Dias O. Capela J, et al. Among authors: dias o. Nucleic Acids Res. 2022 Jun 24;50(11):6052-6066. doi: 10.1093/nar/gkac459. Nucleic Acids Res. 2022. PMID: 35694833 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

130 results

Search Page