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Human Proteome Project Mass Spectrometry Data Interpretation Guidelines 3.0.
Deutsch EW, Lane L, Overall CM, Bandeira N, Baker MS, Pineau C, Moritz RL, Corrales F, Orchard S, Van Eyk JE, Paik YK, Weintraub ST, Vandenbrouck Y, Omenn GS. Deutsch EW, et al. J Proteome Res. 2019 Dec 6;18(12):4108-4116. doi: 10.1021/acs.jproteome.9b00542. Epub 2019 Oct 21. J Proteome Res. 2019. PMID: 31599596 Free PMC article.
A Comprehensive Evaluation of Consensus Spectrum Generation Methods in Proteomics.
Luo X, Bittremieux W, Griss J, Deutsch EW, Sachsenberg T, Levitsky LI, Ivanov MV, Bubis JA, Gabriels R, Webel H, Sanchez A, Bai M, Käll L, Perez-Riverol Y. Luo X, et al. Among authors: deutsch ew. J Proteome Res. 2022 Jun 3;21(6):1566-1574. doi: 10.1021/acs.jproteome.2c00069. Epub 2022 May 13. J Proteome Res. 2022. PMID: 35549218 Free PMC article.
Proteomics Standards Initiative Extended FASTA Format.
Binz PA, Shofstahl J, Vizcaíno JA, Barsnes H, Chalkley RJ, Menschaert G, Alpi E, Clauser K, Eng JK, Lane L, Seymour SL, Sánchez LFH, Mayer G, Eisenacher M, Perez-Riverol Y, Kapp EA, Mendoza L, Baker PR, Collins A, Van Den Bossche T, Deutsch EW. Binz PA, et al. Among authors: deutsch ew. J Proteome Res. 2019 Jun 7;18(6):2686-2692. doi: 10.1021/acs.jproteome.9b00064. Epub 2019 May 23. J Proteome Res. 2019. PMID: 31081335 Free PMC article.
Expanding the Use of Spectral Libraries in Proteomics.
Deutsch EW, Perez-Riverol Y, Chalkley RJ, Wilhelm M, Tate S, Sachsenberg T, Walzer M, Käll L, Delanghe B, Böcker S, Schymanski EL, Wilmes P, Dorfer V, Kuster B, Volders PJ, Jehmlich N, Vissers JPC, Wolan DW, Wang AY, Mendoza L, Shofstahl J, Dowsey AW, Griss J, Salek RM, Neumann S, Binz PA, Lam H, Vizcaíno JA, Bandeira N, Röst H. Deutsch EW, et al. J Proteome Res. 2018 Dec 7;17(12):4051-4060. doi: 10.1021/acs.jproteome.8b00485. Epub 2018 Oct 11. J Proteome Res. 2018. PMID: 30270626 Free PMC article. Review.
188 results