Deng N - Search Results

1

Exercise Training Reduces the Inflammatory Response and Promotes Intestinal Mucosa-Associated Immunity in Lynch Syndrome.

Deng N, Reyes-Uribe L, Fahrmann JF, Thoman WS, Munsell MF, Dennison JB, Murage E, Wu R, Hawk ET, Thirumurthi S, Lynch PM, Dieli-Conwright CM, Lazar AJ, Jindal S, Chu K, Chelvanambi M, Basen-Engquist K, Li Y, Wargo JA, McAllister F, Allison JP, Sharma P, Sinha KM, Hanash S, Gilchrist SC, Vilar E. Deng N, et al. Clin Cancer Res. 2023 Nov 1;29(21):4361-4372. doi: 10.1158/1078-0432.CCR-23-0088. Clin Cancer Res. 2023. PMID: 37724990 Free PMC article. Clinical Trial.

2

Comparative molecular genomic analyses of a spontaneous rhesus macaque model of mismatch repair-deficient colorectal cancer.

Ozirmak Lermi N, Gray SB, Bowen CM, Reyes-Uribe L, Dray BK, Deng N, Harris RA, Raveendran M, Benavides F, Hodo CL, Taggart MW, Colbert Maresso K, Sinha KM, Rogers J, Vilar E. Ozirmak Lermi N, et al. Among authors: deng n. PLoS Genet. 2022 Apr 21;18(4):e1010163. doi: 10.1371/journal.pgen.1010163. eCollection 2022 Apr. PLoS Genet. 2022. PMID: 35446842 Free PMC article.

3

Recurrent Frameshift Neoantigen Vaccine Elicits Protective Immunity With Reduced Tumor Burden and Improved Overall Survival in a Lynch Syndrome Mouse Model.

Gebert J, Gelincik O, Oezcan-Wahlbrink M, Marshall JD, Hernandez-Sanchez A, Urban K, Long M, Cortes E, Tosti E, Katzenmaier EM, Song Y, Elsaadi A, Deng N, Vilar E, Fuchs V, Nelius N, Yuan YP, Ahadova A, Sei S, Shoemaker RH, Umar A, Wei L, Liu S, Bork P, Edelmann W, von Knebel Doeberitz M, Lipkin SM, Kloor M. Gebert J, et al. Among authors: deng n. Gastroenterology. 2021 Oct;161(4):1288-1302.e13. doi: 10.1053/j.gastro.2021.06.073. Epub 2021 Jul 2. Gastroenterology. 2021. PMID: 34224739 Free PMC article.

4

A novel group of genes that cause endocrine resistance in breast cancer identified by dynamic gene expression analysis.

Asghari A, Wall K, Gill M, Vecchio ND, Allahbakhsh F, Wu J, Deng N, Zheng WJ, Wu H, Umetani M, Maroufy V. Asghari A, et al. Among authors: deng n. Oncotarget. 2022 Apr 6;13:600-613. doi: 10.18632/oncotarget.28225. eCollection 2022. Oncotarget. 2022. PMID: 35401937 Free PMC article.

5

ImmuneData: an integrated data discovery system for immunology data repositories.

Deng N, Wu C, Yaseen A, Wu H. Deng N, et al. Database (Oxford). 2022 Mar 9;2022:baac003. doi: 10.1093/database/baac003. Database (Oxford). 2022. PMID: 35262674 Free PMC article.

6

Gene expression dynamic analysis reveals co-activation of Sonic Hedgehog and epidermal growth factor followed by dynamic silencing.

Maroufy V, Shah P, Asghari A, Deng N, Le RNU, Ramirez JC, Yaseen A, Zheng WJ, Umetani M, Wu H. Maroufy V, et al. Among authors: deng n. Oncotarget. 2020 Apr 14;11(15):1358-1372. doi: 10.18632/oncotarget.27547. eCollection 2020 Apr 14. Oncotarget. 2020. PMID: 32341755 Free PMC article.

7

A content-based literature recommendation system for datasets to improve data reusability - A case study on Gene Expression Omnibus (GEO) datasets.

Patra BG, Maroufy V, Soltanalizadeh B, Deng N, Zheng WJ, Roberts K, Wu H. Patra BG, et al. Among authors: deng n. J Biomed Inform. 2020 Apr;104:103399. doi: 10.1016/j.jbi.2020.103399. Epub 2020 Mar 6. J Biomed Inform. 2020. PMID: 32151769 Free article.

8

An informatics research platform to make public gene expression time-course datasets reusable for more scientific discoveries.

Patra BG, Soltanalizadeh B, Deng N, Wu L, Maroufy V, Wu C, Zheng WJ, Roberts K, Wu H, Yaseen A. Patra BG, et al. Among authors: deng n. Database (Oxford). 2020 Nov 28;2020:baaa074. doi: 10.1093/database/baaa074. Database (Oxford). 2020. PMID: 33247935 Free PMC article.

9

Investigation of temporal and spatial heterogeneities of the immune responses to Bordetella pertussis infection in the lung and spleen of mice via analysis and modeling of dynamic microarray gene expression data.

Deng N, Ramirez JC, Carey M, Miao H, Arias CA, Rice AP, Wu H. Deng N, et al. Infect Dis Model. 2019 Jun 7;4:215-226. doi: 10.1016/j.idm.2019.06.001. eCollection 2019. Infect Dis Model. 2019. PMID: 31236525 Free PMC article.

10

H3K27me3 timely dictates uterine epithelial transcriptome remodeling and thus transformation essential for normal embryo implantation.

Deng N, Li G, Zhang L, Wang P, Liu M, He B, Tang Y, Cai H, Lu J, Wang H, Deng W, Bao H, Kong S. Deng N, et al. Cell Death Differ. 2024 May 2. doi: 10.1038/s41418-024-01302-9. Online ahead of print. Cell Death Differ. 2024. PMID: 38698061

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