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Consequences of Genetic Recombination on Protein Folding Stability.
J Mol Evol. 2023 Feb;91(1):33-45. doi: 10.1007/s00239-022-10080-2. Epub 2022 Dec 3.
J Mol Evol. 2023.
PMID: 36463317
Free PMC article.
Consequences of Substitution Model Selection on Protein Ancestral Sequence Reconstruction.
Del Amparo R, Arenas M.
Del Amparo R, et al.
Mol Biol Evol. 2022 Jul 2;39(7):msac144. doi: 10.1093/molbev/msac144.
Mol Biol Evol. 2022.
PMID: 35789388
Free PMC article.
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HIV Protease and Integrase Empirical Substitution Models of Evolution: Protein-Specific Models Outperform Generalist Models.
Del Amparo R, Arenas M.
Del Amparo R, et al.
Genes (Basel). 2021 Dec 27;13(1):61. doi: 10.3390/genes13010061.
Genes (Basel). 2021.
PMID: 35052404
Free PMC article.
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The influence of heterogeneous codon frequencies along sequences on the estimation of molecular adaptation.
Del Amparo R, Vicens A, Arenas M.
Del Amparo R, et al.
Bioinformatics. 2020 Jan 15;36(2):430-436. doi: 10.1093/bioinformatics/btz558.
Bioinformatics. 2020.
PMID: 31304972
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Analysis of selection in protein-coding sequences accounting for common biases.
Del Amparo R, Branco C, Arenas J, Vicens A, Arenas M.
Del Amparo R, et al.
Brief Bioinform. 2021 Sep 2;22(5):bbaa431. doi: 10.1093/bib/bbaa431.
Brief Bioinform. 2021.
PMID: 33479739
Review.
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Influence of substitution model selection on protein phylogenetic tree reconstruction.
Del Amparo R, Arenas M.
Del Amparo R, et al.
Gene. 2023 May 20;865:147336. doi: 10.1016/j.gene.2023.147336. Epub 2023 Mar 3.
Gene. 2023.
PMID: 36871672
Free article.
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Synthesis, structural and spectroscopic studies of 2-oxoacenaphthylen-1(2H)-ylidene nicotinohydrazide.
Henriques MS, Del Amparo R, Pérez-Álvarez D, Nogueira BA, Rodríguez-Argüelles MC, Paixão JA.
Henriques MS, et al. Among authors: del amparo r.
Spectrochim Acta A Mol Biomol Spectrosc. 2017 Feb 5;172:189-198. doi: 10.1016/j.saa.2016.02.012. Epub 2016 Feb 19.
Spectrochim Acta A Mol Biomol Spectrosc. 2017.
PMID: 26944509
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