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Multi-omics comparison of malignant and normal uveal melanocytes reveals molecular features of uveal melanoma.
Gentien D, Saberi-Ansari E, Servant N, Jolly A, de la Grange P, Némati F, Liot G, Saule S, Teissandier A, Bourc'his D, Girard E, Wong J, Masliah-Planchon J, Narmanli E, Liu Y, Torun E, Goulancourt R, Rodrigues M, Gaudé LV, Reyes C, Bazire M, Chenegros T, Henry E, Rapinat A, Bohec M, Baulande S, M'kacher R, Jeandidier E, Nicolas A, Ciriello G, Margueron R, Decaudin D, Cassoux N, Piperno-Neumann S, Stern MH, Gibcus JH, Dekker J, Heard E, Roman-Roman S, Waterfall JJ. Gentien D, et al. Among authors: dekker j. Cell Rep. 2023 Sep 26;42(9):113132. doi: 10.1016/j.celrep.2023.113132. Epub 2023 Sep 13. Cell Rep. 2023. PMID: 37708024 Free PMC article.
Spatial partitioning of the regulatory landscape of the X-inactivation centre.
Nora EP, Lajoie BR, Schulz EG, Giorgetti L, Okamoto I, Servant N, Piolot T, van Berkum NL, Meisig J, Sedat J, Gribnau J, Barillot E, Blüthgen N, Dekker J, Heard E. Nora EP, et al. Among authors: dekker j. Nature. 2012 Apr 11;485(7398):381-5. doi: 10.1038/nature11049. Nature. 2012. PMID: 22495304 Free PMC article.
The context of gene expression regulation.
Gibcus JH, Dekker J. Gibcus JH, et al. Among authors: dekker j. F1000 Biol Rep. 2012;4:8. doi: 10.3410/B4-8. Epub 2012 Apr 2. F1000 Biol Rep. 2012. PMID: 22500194 Free PMC article.
HiTC: exploration of high-throughput 'C' experiments.
Servant N, Lajoie BR, Nora EP, Giorgetti L, Chen CJ, Heard E, Dekker J, Barillot E. Servant N, et al. Among authors: dekker j. Bioinformatics. 2012 Nov 1;28(21):2843-4. doi: 10.1093/bioinformatics/bts521. Epub 2012 Aug 24. Bioinformatics. 2012. PMID: 22923296 Free PMC article.
The hierarchy of the 3D genome.
Gibcus JH, Dekker J. Gibcus JH, et al. Among authors: dekker j. Mol Cell. 2013 Mar 7;49(5):773-82. doi: 10.1016/j.molcel.2013.02.011. Mol Cell. 2013. PMID: 23473598 Free PMC article. Review.
HiC-Pro: an optimized and flexible pipeline for Hi-C data processing.
Servant N, Varoquaux N, Lajoie BR, Viara E, Chen CJ, Vert JP, Heard E, Dekker J, Barillot E. Servant N, et al. Among authors: dekker j. Genome Biol. 2015 Dec 1;16:259. doi: 10.1186/s13059-015-0831-x. Genome Biol. 2015. PMID: 26619908 Free PMC article.
2,179 results