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A Pilot Study of Microbial Succession in Human Rib Skeletal Remains during Terrestrial Decomposition.
mSphere. 2021 Aug 25;6(4):e0045521. doi: 10.1128/mSphere.00455-21. Epub 2021 Jul 14.
mSphere. 2021.
PMID: 34259562
Free PMC article.
The microbiome of fly organs and fly-human microbial transfer during decomposition.
Deel HL, Montoya S, King K, Emmons AL, Huhn C, Lynne AM, Metcalf JL, Bucheli SR.
Deel HL, et al.
Forensic Sci Int. 2022 Nov;340:111425. doi: 10.1016/j.forsciint.2022.111425. Epub 2022 Aug 18.
Forensic Sci Int. 2022.
PMID: 36087369
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A pilot study characterizing gravesoil bacterial communities a decade after swine decomposition.
Burcham ZM, Weitzel MA, Hodges LD, Deel HL, Metcalf JL.
Burcham ZM, et al. Among authors: deel hl.
Forensic Sci Int. 2021 Apr 21;323:110782. doi: 10.1016/j.forsciint.2021.110782. Online ahead of print.
Forensic Sci Int. 2021.
PMID: 33894685
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Experiences and lessons learned from two virtual, hands-on microbiome bioinformatics workshops.
Dillon MR, Bolyen E, Adamov A, Belk A, Borsom E, Burcham Z, Debelius JW, Deel H, Emmons A, Estaki M, Herman C, Keefe CR, Morton JT, Oliveira RRM, Sanchez A, Simard A, Vázquez-Baeza Y, Ziemski M, Miwa HE, Kerere TA, Coote C, Bonneau R, Knight R, Oliveira G, Gopalasingam P, Kaehler BD, Cope EK, Metcalf JL, Robeson Ii MS, Bokulich NA, Caporaso JG.
Dillon MR, et al. Among authors: deel h.
PLoS Comput Biol. 2021 Jun 24;17(6):e1009056. doi: 10.1371/journal.pcbi.1009056. eCollection 2021 Jun.
PLoS Comput Biol. 2021.
PMID: 34166363
Free PMC article.
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A conserved interdomain microbial network underpins cadaver decomposition despite environmental variables.
Burcham ZM, Belk AD, McGivern BB, Bouslimani A, Ghadermazi P, Martino C, Shenhav L, Zhang AR, Shi P, Emmons A, Deel HL, Xu ZZ, Nieciecki V, Zhu Q, Shaffer M, Panitchpakdi M, Weldon KC, Cantrell K, Ben-Hur A, Reed SC, Humphry GC, Ackermann G, McDonald D, Chan SHJ, Connor M, Boyd D, Smith J, Watson JMS, Vidoli G, Steadman D, Lynne AM, Bucheli S, Dorrestein PC, Wrighton KC, Carter DO, Knight R, Metcalf JL.
Burcham ZM, et al. Among authors: deel hl.
Nat Microbiol. 2024 Mar;9(3):595-613. doi: 10.1038/s41564-023-01580-y. Epub 2024 Feb 12.
Nat Microbiol. 2024.
PMID: 38347104
Free PMC article.
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Community structure and abundance of ACC deaminase containing bacteria in soils with 16S-PICRUSt2 inference or direct acdS gene sequencing.
Manter DK, Hamm AK, Deel HL.
Manter DK, et al. Among authors: deel hl.
J Microbiol Methods. 2023 Aug;211:106740. doi: 10.1016/j.mimet.2023.106740. Epub 2023 Jun 9.
J Microbiol Methods. 2023.
PMID: 37301376
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