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Virus Detection by High-Throughput Sequencing of Small RNAs: Large-Scale Performance Testing of Sequence Analysis Strategies.
Massart S, Chiumenti M, De Jonghe K, Glover R, Haegeman A, Koloniuk I, Komínek P, Kreuze J, Kutnjak D, Lotos L, Maclot F, Maliogka V, Maree HJ, Olivier T, Olmos A, Pooggin MM, Reynard JS, Ruiz-García AB, Safarova D, Schneeberger PHH, Sela N, Turco S, Vainio EJ, Varallyay E, Verdin E, Westenberg M, Brostaux Y, Candresse T. Massart S, et al. Among authors: de jonghe k. Phytopathology. 2019 Mar;109(3):488-497. doi: 10.1094/PHYTO-02-18-0067-R. Epub 2019 Feb 7. Phytopathology. 2019. PMID: 30070618 Free article.
A Primer on the Analysis of High-Throughput Sequencing Data for Detection of Plant Viruses.
Kutnjak D, Tamisier L, Adams I, Boonham N, Candresse T, Chiumenti M, De Jonghe K, Kreuze JF, Lefebvre M, Silva G, Malapi-Wight M, Margaria P, Mavrič Pleško I, McGreig S, Miozzi L, Remenant B, Reynard JS, Rollin J, Rott M, Schumpp O, Massart S, Haegeman A. Kutnjak D, et al. Among authors: de jonghe k. Microorganisms. 2021 Apr 14;9(4):841. doi: 10.3390/microorganisms9040841. Microorganisms. 2021. PMID: 33920047 Free PMC article. Review.
Interlaboratory Comparison Study on Ribodepleted Total RNA High-Throughput Sequencing for Plant Virus Diagnostics and Bioinformatic Competence.
Gaafar YZA, Westenberg M, Botermans M, László K, De Jonghe K, Foucart Y, Ferretti L, Kutnjak D, Pecman A, Mehle N, Kreuze J, Muller G, Vakirlis N, Beris D, Varveri C, Ziebell H. Gaafar YZA, et al. Among authors: de jonghe k. Pathogens. 2021 Sep 12;10(9):1174. doi: 10.3390/pathogens10091174. Pathogens. 2021. PMID: 34578206 Free PMC article.
28 results