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Hippo-deficient cardiac fibroblasts differentiate into osteochondroprogenitors.
Tsai CR, Kim J, Li X, Czarnewski P, Li R, Meng F, Zheng M, Zhao X, Steimle J, Grisanti F, Wang J, Samee MAH, Martin J. Tsai CR, et al. Among authors: czarnewski p. bioRxiv [Preprint]. 2023 Sep 8:2023.09.06.556593. doi: 10.1101/2023.09.06.556593. bioRxiv. 2023. PMID: 38529510 Free PMC article. Preprint.
Spatial landmark detection and tissue registration with deep learning.
Ekvall M, Bergenstråhle L, Andersson A, Czarnewski P, Olegård J, Käll L, Lundeberg J. Ekvall M, et al. Among authors: czarnewski p. Nat Methods. 2024 Apr;21(4):673-679. doi: 10.1038/s41592-024-02199-5. Epub 2024 Mar 4. Nat Methods. 2024. PMID: 38438615 Free PMC article.
Intestinal stroma guides monocyte differentiation to macrophages through GM-CSF.
Kvedaraite E, Lourda M, Mouratidou N, Düking T, Padhi A, Moll K, Czarnewski P, Sinha I, Xagoraris I, Kokkinou E, Damdimopoulos A, Weigel W, Hartwig O, Santos TE, Soini T, Van Acker A, Rahkonen N, Flodström Tullberg M, Ringqvist E, Buggert M, Jorns C, Lindforss U, Nordenvall C, Stamper CT, Unnersjö-Jess D, Akber M, Nadisauskaite R, Jansson J, Vandamme N, Sorini C, Grundeken ME, Rolandsdotter H, Rassidakis G, Villablanca EJ, Ideström M, Eulitz S, Arnell H, Mjösberg J, Henter JI, Svensson M. Kvedaraite E, et al. Among authors: czarnewski p. Nat Commun. 2024 Feb 26;15(1):1752. doi: 10.1038/s41467-024-46076-3. Nat Commun. 2024. PMID: 38409190 Free PMC article.
Spatial multimodal analysis of transcriptomes and metabolomes in tissues.
Vicari M, Mirzazadeh R, Nilsson A, Shariatgorji R, Bjärterot P, Larsson L, Lee H, Nilsson M, Foyer J, Ekvall M, Czarnewski P, Zhang X, Svenningsson P, Käll L, Andrén PE, Lundeberg J. Vicari M, et al. Among authors: czarnewski p. Nat Biotechnol. 2023 Sep 4. doi: 10.1038/s41587-023-01937-y. Online ahead of print. Nat Biotechnol. 2023. PMID: 37667091
Multimodal Single-Cell Sequencing of B Cells in Primary Sjögren's Syndrome.
Arvidsson G, Czarnewski P, Johansson A, Raine A, Imgenberg-Kreuz J, Nordlund J, Nordmark G, Syvänen AC. Arvidsson G, et al. Among authors: czarnewski p. Arthritis Rheumatol. 2024 Feb;76(2):255-267. doi: 10.1002/art.42683. Epub 2023 Dec 18. Arthritis Rheumatol. 2024. PMID: 37610265
Molecular and spatial landmarks of early mouse skin development.
Jacob T, Annusver K, Czarnewski P, Dalessandri T, Kalk C, Levra Levron C, Campamà Sanz N, Kastriti ME, Mikkola ML, Rendl M, Lichtenberger BM, Donati G, Björklund ÅK, Kasper M. Jacob T, et al. Among authors: czarnewski p. Dev Cell. 2023 Oct 23;58(20):2140-2162.e5. doi: 10.1016/j.devcel.2023.07.015. Epub 2023 Aug 16. Dev Cell. 2023. PMID: 37591247 Free article.
The single-cell transcriptional landscape of innate and adaptive lymphocytes in pediatric-onset colitis.
Kokkinou E, Soini T, Pandey RV, van Acker A, Theorell J, Czarnewski P, Kvedaraite E, Vandamme N, Lourda M, Sorini C, Weigel W, Carrasco A, Tibbitt CA, Schlums H, Lindforss U, Nordenvall C, Ljunggren M, Ideström M, Svensson M, Henter JI, Villablanca EJ, Bryceson YT, Rolandsdotter H, Mjösberg J. Kokkinou E, et al. Among authors: czarnewski p. Cell Rep Med. 2023 May 16;4(5):101038. doi: 10.1016/j.xcrm.2023.101038. Epub 2023 May 8. Cell Rep Med. 2023. PMID: 37160121 Free PMC article.
35 results