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Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses.
Chow NA, Muñoz JF, Gade L, Berkow EL, Li X, Welsh RM, Forsberg K, Lockhart SR, Adam R, Alanio A, Alastruey-Izquierdo A, Althawadi S, Araúz AB, Ben-Ami R, Bharat A, Calvo B, Desnos-Ollivier M, Escandón P, Gardam D, Gunturu R, Heath CH, Kurzai O, Martin R, Litvintseva AP, Cuomo CA. Chow NA, et al. Among authors: cuomo ca. mBio. 2020 Apr 28;11(2):e03364-19. doi: 10.1128/mBio.03364-19. mBio. 2020. PMID: 32345637 Free PMC article.
Comparative genome analysis of Trichophyton rubrum and related dermatophytes reveals candidate genes involved in infection.
Martinez DA, Oliver BG, Gräser Y, Goldberg JM, Li W, Martinez-Rossi NM, Monod M, Shelest E, Barton RC, Birch E, Brakhage AA, Chen Z, Gurr SJ, Heiman D, Heitman J, Kosti I, Rossi A, Saif S, Samalova M, Saunders CW, Shea T, Summerbell RC, Xu J, Young S, Zeng Q, Birren BW, Cuomo CA, White TC. Martinez DA, et al. Among authors: cuomo ca. mBio. 2012 Sep 4;3(5):e00259-12. doi: 10.1128/mBio.00259-12. Print 2012. mBio. 2012. PMID: 22951933 Free PMC article.
The Dynamic Genome and Transcriptome of the Human Fungal Pathogen Blastomyces and Close Relative Emmonsia.
Muñoz JF, Gauthier GM, Desjardins CA, Gallo JE, Holder J, Sullivan TD, Marty AJ, Carmen JC, Chen Z, Ding L, Gujja S, Magrini V, Misas E, Mitreva M, Priest M, Saif S, Whiston EA, Young S, Zeng Q, Goldman WE, Mardis ER, Taylor JW, McEwen JG, Clay OK, Klein BS, Cuomo CA. Muñoz JF, et al. Among authors: cuomo ca. PLoS Genet. 2015 Oct 6;11(10):e1005493. doi: 10.1371/journal.pgen.1005493. eCollection 2015 Oct. PLoS Genet. 2015. PMID: 26439490 Free PMC article.
50 Years of Emmonsia Disease in Humans: The Dramatic Emergence of a Cluster of Novel Fungal Pathogens.
Schwartz IS, Kenyon C, Feng P, Govender NP, Dukik K, Sigler L, Jiang Y, Stielow JB, Muñoz JF, Cuomo CA, Botha A, Stchigel AM, de Hoog GS. Schwartz IS, et al. Among authors: cuomo ca. PLoS Pathog. 2015 Nov 19;11(11):e1005198. doi: 10.1371/journal.ppat.1005198. eCollection 2015. PLoS Pathog. 2015. PMID: 26584311 Free PMC article. Review. No abstract available.
Genome Diversity, Recombination, and Virulence across the Major Lineages of Paracoccidioides.
Muñoz JF, Farrer RA, Desjardins CA, Gallo JE, Sykes S, Sakthikumar S, Misas E, Whiston EA, Bagagli E, Soares CM, Teixeira MM, Taylor JW, Clay OK, McEwen JG, Cuomo CA. Muñoz JF, et al. Among authors: cuomo ca. mSphere. 2016 Sep 28;1(5):e00213-16. doi: 10.1128/mSphere.00213-16. eCollection 2016 Sep-Oct. mSphere. 2016. PMID: 27704050 Free PMC article.
Simultaneous Emergence of Multidrug-Resistant Candida auris on 3 Continents Confirmed by Whole-Genome Sequencing and Epidemiological Analyses.
Lockhart SR, Etienne KA, Vallabhaneni S, Farooqi J, Chowdhary A, Govender NP, Colombo AL, Calvo B, Cuomo CA, Desjardins CA, Berkow EL, Castanheira M, Magobo RE, Jabeen K, Asghar RJ, Meis JF, Jackson B, Chiller T, Litvintseva AP. Lockhart SR, et al. Among authors: cuomo ca. Clin Infect Dis. 2017 Jan 15;64(2):134-140. doi: 10.1093/cid/ciw691. Epub 2016 Oct 20. Clin Infect Dis. 2017. PMID: 27988485 Free PMC article.
Novel taxa of thermally dimorphic systemic pathogens in the Ajellomycetaceae (Onygenales).
Dukik K, Muñoz JF, Jiang Y, Feng P, Sigler L, Stielow JB, Freeke J, Jamalian A, Gerrits van den Ende B, McEwen JG, Clay OK, Schwartz IS, Govender NP, Maphanga TG, Cuomo CA, Moreno LF, Kenyon C, Borman AM, de Hoog S. Dukik K, et al. Among authors: cuomo ca. Mycoses. 2017 May;60(5):296-309. doi: 10.1111/myc.12601. Epub 2017 Feb 7. Mycoses. 2017. PMID: 28176377 Free PMC article.
179 results