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A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity.
Wylensek D, Hitch TCA, Riedel T, Afrizal A, Kumar N, Wortmann E, Liu T, Devendran S, Lesker TR, Hernández SB, Heine V, Buhl EM, M D'Agostino P, Cumbo F, Fischöder T, Wyschkon M, Looft T, Parreira VR, Abt B, Doden HL, Ly L, Alves JMP, Reichlin M, Flisikowski K, Suarez LN, Neumann AP, Suen G, de Wouters T, Rohn S, Lagkouvardos I, Allen-Vercoe E, Spröer C, Bunk B, Taverne-Thiele AJ, Giesbers M, Wells JM, Neuhaus K, Schnieke A, Cava F, Segata N, Elling L, Strowig T, Ridlon JM, Gulder TAM, Overmann J, Clavel T. Wylensek D, et al. Among authors: cumbo f. Nat Commun. 2020 Dec 15;11(1):6389. doi: 10.1038/s41467-020-19929-w. Nat Commun. 2020. PMID: 33319778 Free PMC article.
Genomic diversity and ecology of human-associated Akkermansia species in the gut microbiome revealed by extensive metagenomic assembly.
Karcher N, Nigro E, Punčochář M, Blanco-Míguez A, Ciciani M, Manghi P, Zolfo M, Cumbo F, Manara S, Golzato D, Cereseto A, Arumugam M, Bui TPN, Tytgat HLP, Valles-Colomer M, de Vos WM, Segata N. Karcher N, et al. Among authors: cumbo f. Genome Biol. 2021 Jul 14;22(1):209. doi: 10.1186/s13059-021-02427-7. Genome Biol. 2021. PMID: 34261503 Free PMC article.
Commensal Bifidobacterium Strains Enhance the Efficacy of Neo-Epitope Based Cancer Vaccines.
Tomasi M, Dalsass M, Beghini F, Zanella I, Caproni E, Fantappiè L, Gagliardi A, Irene C, König E, Frattini L, Masetti G, Isaac SJ, Armanini F, Cumbo F, Blanco-Míguez A, Grandi A, Segata N, Grandi G. Tomasi M, et al. Among authors: cumbo f. Vaccines (Basel). 2021 Nov 18;9(11):1356. doi: 10.3390/vaccines9111356. Vaccines (Basel). 2021. PMID: 34835287 Free PMC article.
Outer Membrane Vesicles From The Gut Microbiome Contribute to Tumor Immunity by Eliciting Cross-Reactive T Cells.
Tomasi M, Caproni E, Benedet M, Zanella I, Giorgetta S, Dalsass M, König E, Gagliardi A, Fantappiè L, Berti A, Tamburini S, Croia L, Di Lascio G, Bellini E, Valensin S, Licata G, Sebastiani G, Dotta F, Armanini F, Cumbo F, Asnicar F, Blanco-Míguez A, Ruggiero E, Segata N, Grandi G, Grandi A. Tomasi M, et al. Among authors: cumbo f. Front Oncol. 2022 Jun 30;12:912639. doi: 10.3389/fonc.2022.912639. eCollection 2022. Front Oncol. 2022. PMID: 35847919 Free PMC article.
Variability of strain engraftment and predictability of microbiome composition after fecal microbiota transplantation across different diseases.
Ianiro G, Punčochář M, Karcher N, Porcari S, Armanini F, Asnicar F, Beghini F, Blanco-Míguez A, Cumbo F, Manghi P, Pinto F, Masucci L, Quaranta G, De Giorgi S, Sciumè GD, Bibbò S, Del Chierico F, Putignani L, Sanguinetti M, Gasbarrini A, Valles-Colomer M, Cammarota G, Segata N. Ianiro G, et al. Among authors: cumbo f. Nat Med. 2022 Sep;28(9):1913-1923. doi: 10.1038/s41591-022-01964-3. Epub 2022 Sep 15. Nat Med. 2022. PMID: 36109637 Free PMC article.
The person-to-person transmission landscape of the gut and oral microbiomes.
Valles-Colomer M, Blanco-Míguez A, Manghi P, Asnicar F, Dubois L, Golzato D, Armanini F, Cumbo F, Huang KD, Manara S, Masetti G, Pinto F, Piperni E, Punčochář M, Ricci L, Zolfo M, Farrant O, Goncalves A, Selma-Royo M, Binetti AG, Becerra JE, Han B, Lusingu J, Amuasi J, Amoroso L, Visconti A, Steves CM, Falchi M, Filosi M, Tett A, Last A, Xu Q, Qin N, Qin H, May J, Eibach D, Corrias MV, Ponzoni M, Pasolli E, Spector TD, Domenici E, Collado MC, Segata N. Valles-Colomer M, et al. Among authors: cumbo f. Nature. 2023 Feb;614(7946):125-135. doi: 10.1038/s41586-022-05620-1. Epub 2023 Jan 18. Nature. 2023. PMID: 36653448 Free PMC article.
39 results