Cui L - Search Results

1

Pantoea Bacteriophage vB_PagS_MED16-A Siphovirus Containing a 2'-Deoxy-7-amido-7-deazaguanosine-Modified DNA.

Šimoliūnienė M, Žukauskienė E, Truncaitė L, Cui L, Hutinet G, Kazlauskas D, Kaupinis A, Skapas M, Crécy-Lagard V, Dedon PC, Valius M, Meškys R, Šimoliūnas E. Šimoliūnienė M, et al. Among authors: cui l. Int J Mol Sci. 2021 Jul 8;22(14):7333. doi: 10.3390/ijms22147333. Int J Mol Sci. 2021. PMID: 34298953 Free PMC article.

2

Infection-induced colitis in mice causes dynamic and tissue-specific changes in stress response and DNA damage leading to colon cancer.

Mangerich A, Knutson CG, Parry NM, Muthupalani S, Ye W, Prestwich E, Cui L, McFaline JL, Mobley M, Ge Z, Taghizadeh K, Wishnok JS, Wogan GN, Fox JG, Tannenbaum SR, Dedon PC. Mangerich A, et al. Among authors: cui l. Proc Natl Acad Sci U S A. 2012 Jul 3;109(27):E1820-9. doi: 10.1073/pnas.1207829109. Epub 2012 Jun 11. Proc Natl Acad Sci U S A. 2012. PMID: 22689960 Free PMC article.

3

In situ analysis of 8-oxo-7,8-dihydro-2'-deoxyguanosine oxidation reveals sequence- and agent-specific damage spectra.

Lim KS, Cui L, Taghizadeh K, Wishnok JS, Chan W, DeMott MS, Babu IR, Tannenbaum SR, Dedon PC. Lim KS, et al. Among authors: cui l. J Am Chem Soc. 2012 Oct 31;134(43):18053-64. doi: 10.1021/ja307525h. Epub 2012 Oct 22. J Am Chem Soc. 2012. PMID: 23057664 Free PMC article.

4

Comparative analysis of four oxidized guanine lesions from reactions of DNA with peroxynitrite, singlet oxygen, and γ-radiation.

Cui L, Ye W, Prestwich EG, Wishnok JS, Taghizadeh K, Dedon PC, Tannenbaum SR. Cui L, et al. Chem Res Toxicol. 2013 Feb 18;26(2):195-202. doi: 10.1021/tx300294d. Epub 2013 Jan 24. Chem Res Toxicol. 2013. PMID: 23140136 Free PMC article.

5

Allosteric pyruvate kinase-based "logic gate" synergistically senses energy and sugar levels in Mycobacterium tuberculosis.

Zhong W, Cui L, Goh BC, Cai Q, Ho P, Chionh YH, Yuan M, Sahili AE, Fothergill-Gilmore LA, Walkinshaw MD, Lescar J, Dedon PC. Zhong W, et al. Among authors: cui l. Nat Commun. 2017 Dec 7;8(1):1986. doi: 10.1038/s41467-017-02086-y. Nat Commun. 2017. PMID: 29215013 Free PMC article.

6

Pyruvate Kinase Regulates the Pentose-Phosphate Pathway in Response to Hypoxia in Mycobacterium tuberculosis.

Zhong W, Guo J, Cui L, Chionh YH, Li K, El Sahili A, Cai Q, Yuan M, Michels PAM, Fothergill-Gilmore LA, Walkinshaw MD, Mu Y, Lescar J, Dedon PC. Zhong W, et al. Among authors: cui l. J Mol Biol. 2019 Sep 6;431(19):3690-3705. doi: 10.1016/j.jmb.2019.07.033. Epub 2019 Aug 2. J Mol Biol. 2019. PMID: 31381898 Free article.

7

Quantifying the RNA cap epitranscriptome reveals novel caps in cellular and viral RNA.

Wang J, Alvin Chew BL, Lai Y, Dong H, Xu L, Balamkundu S, Cai WM, Cui L, Liu CF, Fu XY, Lin Z, Shi PY, Lu TK, Luo D, Jaffrey SR, Dedon PC. Wang J, et al. Among authors: cui l. Nucleic Acids Res. 2019 Nov 18;47(20):e130. doi: 10.1093/nar/gkz751. Nucleic Acids Res. 2019. PMID: 31504804 Free PMC article.

8

7-Deazaguanine modifications protect phage DNA from host restriction systems.

Hutinet G, Kot W, Cui L, Hillebrand R, Balamkundu S, Gnanakalai S, Neelakandan R, Carstens AB, Fa Lui C, Tremblay D, Jacobs-Sera D, Sassanfar M, Lee YJ, Weigele P, Moineau S, Hatfull GF, Dedon PC, Hansen LH, de Crécy-Lagard V. Hutinet G, et al. Among authors: cui l. Nat Commun. 2019 Nov 29;10(1):5442. doi: 10.1038/s41467-019-13384-y. Nat Commun. 2019. PMID: 31784519 Free PMC article.

9

Detection of preQ0 deazaguanine modifications in bacteriophage CAjan DNA using Nanopore sequencing reveals same hypermodification at two distinct DNA motifs.

Kot W, Olsen NS, Nielsen TK, Hutinet G, de Crécy-Lagard V, Cui L, Dedon PC, Carstens AB, Moineau S, Swairjo MA, Hansen LH. Kot W, et al. Among authors: cui l. Nucleic Acids Res. 2020 Oct 9;48(18):10383-10396. doi: 10.1093/nar/gkaa735. Nucleic Acids Res. 2020. PMID: 32941607 Free PMC article.

10

Illuminating Host-Mycobacterial Interactions with Genome-wide CRISPR Knockout and CRISPRi Screens.

Lai Y, Babunovic GH, Cui L, Dedon PC, Doench JG, Fortune SM, Lu TK. Lai Y, et al. Among authors: cui l. Cell Syst. 2020 Sep 23;11(3):239-251.e7. doi: 10.1016/j.cels.2020.08.010. Cell Syst. 2020. PMID: 32970993 Free article.

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