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Page 1
Single-Cell Profiling Reveals Immune Aberrations in Progressive Idiopathic Pulmonary Fibrosis.
Unterman A, Zhao AY, Neumark N, Schupp JC, Ahangari F, Cosme C Jr, Sharma P, Flint J, Stein Y, Ryu C, Ishikawa G, Sumida TS, Gomez JL, Herazo-Maya JD, Dela Cruz CS, Herzog EL, Kaminski N. Unterman A, et al. Among authors: cosme c jr. Am J Respir Crit Care Med. 2024 May 8. doi: 10.1164/rccm.202306-0979OC. Online ahead of print. Am J Respir Crit Care Med. 2024. PMID: 38717443
Single-cell profiling reveals immune aberrations in progressive idiopathic pulmonary fibrosis.
Unterman A, Zhao AY, Neumark N, Schupp JC, Ahangari F, Cosme C Jr, Sharma P, Flint J, Stein Y, Ryu C, Ishikawa G, Sumida TS, Gomez JL, Herazo-Maya J, Dela Cruz CS, Herzog EL, Kaminski N. Unterman A, et al. Among authors: cosme c jr. medRxiv [Preprint]. 2023 Apr 29:2023.04.29.23289296. doi: 10.1101/2023.04.29.23289296. medRxiv. 2023. PMID: 37163015 Free PMC article. Preprint.
CINS: Cell Interaction Network inference from Single cell expression data.
Yuan Y, Cosme C Jr, Adams TS, Schupp J, Sakamoto K, Xylourgidis N, Ruffalo M, Li J, Kaminski N, Bar-Joseph Z. Yuan Y, et al. Among authors: cosme c jr. PLoS Comput Biol. 2022 Sep 12;18(9):e1010468. doi: 10.1371/journal.pcbi.1010468. eCollection 2022 Sep. PLoS Comput Biol. 2022. PMID: 36095011 Free PMC article.
Characterization of the COPD alveolar niche using single-cell RNA sequencing.
Sauler M, McDonough JE, Adams TS, Kothapalli N, Barnthaler T, Werder RB, Schupp JC, Nouws J, Robertson MJ, Coarfa C, Yang T, Chioccioli M, Omote N, Cosme C Jr, Poli S, Ayaub EA, Chu SG, Jensen KH, Gomez JL, Britto CJ, Raredon MSB, Niklason LE, Wilson AA, Timshel PN, Kaminski N, Rosas IO. Sauler M, et al. Among authors: cosme c jr. Nat Commun. 2022 Jan 25;13(1):494. doi: 10.1038/s41467-022-28062-9. Nat Commun. 2022. PMID: 35078977 Free PMC article.
Single-cell multi-omics reveals dyssynchrony of the innate and adaptive immune system in progressive COVID-19.
Unterman A, Sumida TS, Nouri N, Yan X, Zhao AY, Gasque V, Schupp JC, Asashima H, Liu Y, Cosme C Jr, Deng W, Chen M, Raredon MSB, Hoehn KB, Wang G, Wang Z, DeIuliis G, Ravindra NG, Li N, Castaldi C, Wong P, Fournier J, Bermejo S, Sharma L, Casanovas-Massana A, Vogels CBF, Wyllie AL, Grubaugh ND, Melillo A, Meng H, Stein Y, Minasyan M, Mohanty S, Ruff WE, Cohen I, Raddassi K; Yale IMPACT Research Team; Niklason LE, Ko AI, Montgomery RR, Farhadian SF, Iwasaki A, Shaw AC, van Dijk D, Zhao H, Kleinstein SH, Hafler DA, Kaminski N, Dela Cruz CS. Unterman A, et al. Among authors: cosme c jr. Nat Commun. 2022 Jan 21;13(1):440. doi: 10.1038/s41467-021-27716-4. Nat Commun. 2022. PMID: 35064122 Free PMC article.
Mechanisms of Hypoxia-Induced Pulmonary Arterial Stiffening in Mice Revealed by a Functional Genetics Assay of Structural, Functional, and Transcriptomic Data.
Manning EP, Ramachandra AB, Schupp JC, Cavinato C, Raredon MSB, Bärnthaler T, Cosme C Jr, Singh I, Tellides G, Kaminski N, Humphrey JD. Manning EP, et al. Among authors: cosme c jr. Front Physiol. 2021 Sep 14;12:726253. doi: 10.3389/fphys.2021.726253. eCollection 2021. Front Physiol. 2021. PMID: 34594238 Free PMC article.
Integrated Single-Cell Atlas of Endothelial Cells of the Human Lung.
Schupp JC, Adams TS, Cosme C Jr, Raredon MSB, Yuan Y, Omote N, Poli S, Chioccioli M, Rose KA, Manning EP, Sauler M, DeIuliis G, Ahangari F, Neumark N, Habermann AC, Gutierrez AJ, Bui LT, Lafyatis R, Pierce RW, Meyer KB, Nawijn MC, Teichmann SA, Banovich NE, Kropski JA, Niklason LE, Pe'er D, Yan X, Homer RJ, Rosas IO, Kaminski N. Schupp JC, et al. Among authors: cosme c jr. Circulation. 2021 Jul 27;144(4):286-302. doi: 10.1161/CIRCULATIONAHA.120.052318. Epub 2021 May 25. Circulation. 2021. PMID: 34030460 Free PMC article.
The Idiopathic Pulmonary Fibrosis Cell Atlas.
Neumark N, Cosme C Jr, Rose KA, Kaminski N. Neumark N, et al. Among authors: cosme c jr. Am J Physiol Lung Cell Mol Physiol. 2020 Dec 1;319(6):L887-L893. doi: 10.1152/ajplung.00451.2020. Epub 2020 Sep 30. Am J Physiol Lung Cell Mol Physiol. 2020. PMID: 32996785 Free PMC article. No abstract available.